chr cm_min cm_max indel ID ultra_contig indel type Predicted indel size (bp) Sequence (AF16/HK104) Primer up Primer down Predicted AF16 band (bp) Predicted HK104 band (bp) 1 0.65 0.65 cb-s12 cb25.fpc0006 Deletion 9 CGGAAAAAA/--------- CCCCACTCTAAAAACTGTAAAAT TTGTTGGAATTGCTGAAACT 304 295 1 0.65 0.65 cb-s13 cb25.fpc0006 Insertion 11 -----------/TCGTTACCAGA TTTCAGAACAGTACCCTTAAAGA AAGTTGGAAAATGAACCAATAAT 298 309 1 0.65 0.65 bhP19 cb25.fpc2695 Deletion 32 GAAATGTATCAGAACGGAGAAAATGTATCAGA/-------------------------------- AAAAAGGAATTGTCTCATTCAA TTTAATTTTCAAACCTCAAAGTG 247 215 1 0.65 0.65 cb-s179 cb25.fpc2695 Insertion 14 --------------/ATATATATATATAT TTCTAGAGCTCTTTCTCTCTCCT GAAAATATATCGCAAAAGAACAA 299 313 1 3.91 5.71 cb-s78 cb25.fpc0091b Deletion 13 AGATATCAAAAAC/------------- TCACTTTAATGTTATCACCAACA TAGAATTGGCTCGGACAGTA 280 267 1 3.91 5.71 cb-s79 cb25.fpc0091b Insertion 14 --------------/TTTAGATTTTATAG GAATTTTCGAACAGTTATATCTCA GAATGACGTAAATCGACACAT 298 312 1 13.45 13.45 cb-s355 cb25.fpc4321 Insertion 7 -------/CAGACAG GATCTCTTTCAGCTTTCAATTC TTACCTCGTCTGTCAACTTGTAT 300 307 1 13.45 13.45 cb-s356 cb25.fpc4321 Deletion 8 ACTACAGT/-------- GCTACAGTAATCTGGGAAATAGG GCAACATTAATATCGGGTTACT 304 296 1 13.45 13.45 cb-s357 cb25.fpc4321 Insertion 8 --------/CTGATCTT CTGCTTGGTTACAGTATCTCATT AAAAAGTTCGGGGAAAATAA 289 297 1 13.45 13.45 cb-s358 cb25.fpc4321 Deletion 9 GAATTTTTT/--------- ATTTATAGCAGTTTAGCCAAAAA CAGGTATAAATTACTTGAAGTGGA 296 287 1 13.45 13.45 cb-s359 cb25.fpc4321 Deletion 9 CTTATAAAT/--------- GCTACAGTAATCTGGGAAATAGG GCAACATTAATATCGGGTTACT 304 295 1 13.45 13.45 cb-s360 cb25.fpc4321 Insertion 11 -----------/CAAAGGAGCAA TAGCCTTCTGTTGAAATGATATG AATTTGGTTTCGGATACTGATA 298 309 1 14.03 14.03 cb-s66 cb25.fpc0071c Deletion 7 GATGGGA/------- CGTTTTGGTTATAATGACAGAAT TTACAAAAGGGAAAAATTGAACT 299 292 1 14.03 14.03 cb-s67 cb25.fpc0071c Insertion 7 -------/TAACATC CATTTTTCTTCCTTTCCTACTTC AGACATCGTATCTGTTTGAAAAT 300 307 1 14.03 14.03 cb-s68 cb25.fpc0071c Insertion 8 --------/GGGGGGGG ATTCATGCCCTTTATTTGACT GTTAGGCGTCAGTTGTACATATC 288 296 1 14.03 14.03 cb-s69 cb25.fpc0071c Deletion 10 TCTCTCTCTC/---------- TTCGAACAATGAATAAATTAGATG CTAATATCCTCCTCCAGTCCTC 300 290 1 14.03 14.03 cb-s70 cb25.fpc0071c Deletion 20 TGTGAGAGATTGGGCTGAGA/-------------------- ACACTCGTCGTTTAAAAATAGAA ATCATCTTCTTCTTCTTCGTCTT 300 280 1 14.03 14.03 cb-s71 cb25.fpc0071c Insertion 20 --------------------/TTTTTTAACAAGCCCAGAAT AGGAAATACGGTGATTACTTTG GAAGTCAAAACTTTCGAATACAT 281 301 1 14.03 14.03 bhP43 cb25.fpc3857b Insertion 12 ------------/AAATAAAAAAAA CAATAAAAATATTGTAGGGACCA AGAGAGGTTAGAGGGAGAAAAG 245 257 1 15.31 15.31 cb-s185 cb25.fpc2887d Deletion 8 GCATATTT/-------- GTCTGAAATTCTGAAAGACCTTA CCAAGAAACAAGAAATCAGAAT 347 339 1 15.31 15.31 cb-s186 cb25.fpc2887d Insertion 8 --------/CCCGGCCC TGTGAAAGCAGTTTTCTGACT AGACGACTGAGGATTCTGGT 393 401 1 15.90 15.90 cb-s133 cb25.fpc1417 Deletion 9 GAGAGGGAG/--------- GATCTTGTTGAGAAAAGAGGAG CCACATTTATCAAAAGTTTTCTC 300 291 1 16.49 19.43 cb-s187 cb25.fpc2888a Insertion 7 -------/ATTTTTA TGTTCATTCATATGACAAAGAAATA TTTTTGTTTCCTCAACTACATTT 298 305 1 16.49 19.43 cb-s188 cb25.fpc2888a Insertion 8 --------/CCATATCA TGGAGAAATATTACGAAAAGTTG TCCCTTTTTAAGAAATTGGTAAC 305 313 1 16.49 19.43 cb-s189 cb25.fpc2888a Deletion 9 CTTGTCCGA/--------- AATTCTATTCCTCTGAGCTCTTC AAGGAGAGATGGGAATTAGTATG 293 284 1 16.49 19.43 cb-s190 cb25.fpc2888a Insertion 10 ----------/AGGTATATAT GATGAATTATCCCTTATCCAAGT TCAATCAAAAGAGAATGGAATTA 292 302 1 16.49 19.43 cb-s191 cb25.fpc2888a Insertion 15 ---------------/ATAGGTGCAGAATCT CTTAAATTAAAACGACTCGAAAA ACTGGGAGTTTGAGAAACTTTA 292 307 1 16.49 19.43 cb-s192 cb25.fpc2888a Insertion 29 -----------------------------/TCTCTAAATTTTTTCTCCCCTATTCGAAT TTATTTTTCTGGAAAGCTTTAATC ACCATATGTTACTGTTGAGGAGA 300 329 1 16.49 19.43 cb-s193 cb25.fpc2888a Deletion 30 CTCTCTCTCTCTCTCTCTCTCTTTCTTTCT/------------------------------ AATGAGGAAGAAATTAGTAAACAGA CTTTTTCCCTCATATGTCAGTC 299 269 1 20.04 20.04 cb-s324 cb25.fpc4171 Deletion 12 CTGTCCCCCGAA/------------ AAAAATATTAAAAGAGGCCAGAC ATCAATTTCTTTAGTAACCGATTT 298 286 1 21.23 21.23 bhP7 cb25.fpc2032 Deletion 7 TCCAATC/------- GTGTCATGTCATACTCTGAAACA ATGAATTCTCCATTCATCTATCA 246 239 1 21.82 21.82 bhP1 cb25.fpc3441 Insertion 10 ----------/GGCGTTTTTT CTTCAACTCTGGTTTTCAATG AAACCACTAAATTAACGATTCTCT 250 260 1 21.82 21.82 cb-s209 cb25.fpc3441 Insertion 11 -----------/GGGGGGGGGGG AAAGTTATGACATGCTCTACAAAA AAACCGAAAAATCTCCTTTAAT 300 311 1 21.82 21.82 cb-s210 cb25.fpc3441 Deletion 14 GAGAGAGAGAGAGA/-------------- TCTCTCACATACTGTTTTTCCTC TAACCTAAATGTCAACCACTTTC 300 286 1 21.82 21.82 cb-s211 cb25.fpc3441 Deletion 18 CTATGTCCTAGGATTGGA/------------------ TAGGGATAGTGTGGTGTAATAAAG TTTCATAGAAGAAGTCAAAATATGAT 303 285 1 31.56 31.56 cb-s253 cb25.fpc4030b Deletion 7 TTGGAAG/------- AGAGAGAAAGCAAGAGAAAGAAG GTATTAGAAAGCAAAAGAAGATCC 300 293 1 31.56 31.56 cb-s254 cb25.fpc4030b Deletion 9 CTTTTCACC/--------- TGGAAAATTTACAGTTTGTTTTG ATTTACACAAATGGCCTAGAAAT 300 291 1 31.56 31.56 cb-s255 cb25.fpc4030b Insertion 9 ---------/GAATCAGTC CTTCACCTTCTTCAGACAATTC TTAAAAGGTCCCCTTGTTAGTT 296 305 1 31.56 31.56 cb-s256 cb25.fpc4030b Insertion 11 -----------/GGCCTAAAAAT TTAATTTGATGAAGTTCACATTTC CCCAAAAGTTGGTCTAAAAA 299 310 1 31.56 31.56 cb-s257 cb25.fpc4030b Deletion 13 CACGAAAAAAAAG/------------- TCTCTGAAAAATTGATTCAAAAC TCCTCAAAAACAAAACAAAAAC 299 286 1 31.56 31.56 cb-s258 cb25.fpc4030b Deletion 15 CTATTACTCTCTAGA/--------------- ACTTTCAATGAGCAATTTTTCTA GTAGTTTTTCCCAGCAGAAAT 300 285 1 31.56 31.56 cb-s259 cb25.fpc4030b Deletion 17 GAATTTCTTCGAAAAAT/----------------- AATTTTACAGCGAAAATTAGGAT AAAATTTAAAAACTTGCTCGTAA 294 277 1 31.56 31.56 cb-s260 cb25.fpc4030b Deletion 24 AAAAAAAGGTGCCTGAGACAAATT/------------------------ AATTAGAGGAGAAACATCATTTG GAAATTATCTGAACATCGAAAAA 304 280 1 43.93 43.93 bhP29 cb25.fpc4140 Deletion 17 ACGGATTGAAAACGGTC/----------------- GAGCTTATTAAAGGACGGTATTC CAGATACCGTAGACCAGTTACC 248 231 1 43.93 43.93 cb-s314 cb25.fpc4140 Insertion 7 -------/GGGGGGG GGTTAATTTTGGTAGTTTCAACA ATAATTTTCACTTTTTGGCTCAT 302 309 1 43.93 43.93 cb-s315 cb25.fpc4140 Insertion 7 -------/GTCCAGG CGCTAGATTCTTGAGCCTATT ATAGCTGACATTGCTGACCT 349 356 1 43.93 43.93 cb-s316 cb25.fpc4140 Deletion 8 ATATGGCA/-------- GTCTTGAAACACTTGCAAAAA AGTTTTCAGGTGATTGATTTTCT 300 292 1 43.93 43.93 cb-s317 cb25.fpc4140 Deletion 14 GAATTCAAAAAAAA/-------------- CAACATTCGAAACTTCACACT CTCGTTTCTACCCTCTTAGTTTT 299 285 1 43.93 43.93 cb-s318 cb25.fpc4140 Insertion 17 -----------------/TTTGGTTCTATGTAAAT GTTCTGCAATAACACCTATTTTC TTTCTTTTCTTAGAATCCCAAAT 290 307 1 43.93 43.93 cb-s319 cb25.fpc4140 Insertion 22 ----------------------/TGTGTGTGTGAGAGAGAGAGAG GTTCTCGCAATTAAAGAAAAAT GTGGTGTAATTGTTGTGTCTTCT 299 321 2 0.00 0.00 cb-s22 cb25.fpc0022b Insertion 7 -------/TTAAAAG AATTATTTTTGTCTCCCATTCTT CGAAAATCCAGAAACTAGAAAA 296 303 2 0.00 0.00 cb-s23 cb25.fpc0022b Deletion 8 CCCCCCCC/-------- AGAATCTCAGAAGGTTTTCTAGG AAAAAGAAGAGACAAAAGAAGAAG 294 286 2 0.00 0.00 cb-s24 cb25.fpc0022b Insertion 9 ---------/GGCTACAAA AATAAAGTGATTTTTGGGCTAAT GAGCTTAAATCACAATCTTCTCA 291 300 2 0.00 0.00 cb-s25 cb25.fpc0022b Insertion 13 -------------/TAGACAGTCAATT TTTGAACTTGCTATAAATTCTACG ACGCTTTATACTTCGGTTCTC 299 312 2 0.00 0.00 cb-s26 cb25.fpc0022b Deletion 15 GAGAGAGAGAGAGAG/--------------- CATAAATCCACTTTTCACCATTA CCTTATTCATCCAATTTCTACAC 298 283 2 0.00 0.00 cb-s27 cb25.fpc0022b Insertion 18 ------------------/GAAAATGTAAAAAATTTT AATTATTTTTGTCTCCCATTCTT CGAAAATCCAGAAACTAGAAAA 296 314 2 0.00 0.00 cb-s28 cb25.fpc0022b Deletion 20 GAGAGAGAGAGAGAGAGAGA/-------------------- CATAAATCCACTTTTCACCATTA CCTTATTCATCCAATTTCTACAC 298 278 2 0.00 0.00 cb-s29 cb25.fpc0022b Insertion 20 --------------------/GTGTGTGTGTGTGTGTGTGT GGTATTTTTAGTTTCCCAAAGTT AAAAGACACAGTAATCCAGTCAG 288 308 2 0.00 0.00 cb-s30 cb25.fpc0022b Insertion 32 --------------------------------/AAAGTCGATTTTTTTCACTGGAGTTTCCCTCA TCTCCGGTTTCAATACTATACTC AGGGAAACTCCAGTGAAAAA 288 320 2 2.38 2.38 bhP20 cb25.fpc4168 Deletion 21 GGGCTCAAAATCAACATTTTC/--------------------- GAAATTTCAGACCCAAAAACTAT AAATTTGAAGGCAAAAATGATA 248 227 2 6.96 7.57 cb-s353 cb25.fpc4292 Insertion 9 ---------/TCTCTCTCT ACTGGTTATTTTCTTCACTCCTC GAACTCATCAATGTTGCTCTATT 300 309 2 6.96 7.57 cb-s354 cb25.fpc4292 Deletion 10 GTCTCGTTGT/---------- AAATTCCGATTTGTCTAAATTCT TGATCAGAAAAACACCTAACTCT 243 233 2 8.19 8.19 cb-s65 cb25.fpc0071a Insertion 14 --------------/CACAAACTACAAAC GAAATGCTGTACCACTTTTGTAG GAGCATCATGTACAACTGGTATC 297 311 2 10.69 11.27 bhP2 cb25.fpc3052a Deletion 7 TATTGAT/------- AGAAAAATCCGACAGAATAAAAT TGTGTGTCATTTTTGATACTTTG 243 236 2 10.69 11.27 bhP33 cb25.fpc3052a Deletion 44 CTGGGTCATGACCCAAATTTTCTAGGTCATACCCTAATTTTTTT/-------------------------------------------- GATCACGAGCTAATTTTTAGGAT AAAAATCAGGTAATGAACTAGAAAA 245 201 2 10.69 11.27 cb-s198 cb25.fpc3052a Deletion 7 GCATTTA/------- CTGTAATCATCAGGGATTACTGT AGAAACGTCTATGTTGCTAAAGA 294 287 2 10.69 11.27 cb-s199 cb25.fpc3052a Insertion 7 -------/AATTTTA GGAGAAGAAGGATTCAGAGAA CGAAATTCGATTTTGAGATTAT 299 306 2 10.69 11.27 cb-s200 cb25.fpc3052a Insertion 8 --------/CGCGTGGC TACAACGCTTAATGTCACTCTG GATGAAGCATCACTATTTTCAGT 301 309 2 10.69 11.27 cb-s201 cb25.fpc3052a Insertion 9 ---------/GCCCGTTTG TACTGGACCAACGAAGATTTAG AATTTCAGAAAATTGGCAATAA 300 309 2 10.69 11.27 cb-s202 cb25.fpc3052a Deletion 10 TCAATTTAGG/---------- CTGTAATCATCAGGGATTACTGT AGAAACGTCTATGTTGCTAAAGA 294 284 2 10.69 11.27 cb-s203 cb25.fpc3052a Deletion 11 CAGTAAGCCGC/----------- TAGAAATTGAGGTTTCGAAGTTA ATTTTGCAGATGGACAACAC 298 287 2 10.69 11.27 cb-s204 cb25.fpc3052a Insertion 12 ------------/TTGGTCGGTCGG CTGTAATCATCAGGGATTACTGT AGAAACGTCTATGTTGCTAAAGA 294 306 2 10.69 11.27 cb-s205 cb25.fpc3052a Deletion 20 CTAACCTGATAAGGGTGTCA/-------------------- GAGAGACCTGAAAAGCTTTAAGTA CATCGAATTGAAAAATGAGATT 301 281 2 10.69 11.27 cb-s206 cb25.fpc3052a Deletion 26 ATGTCCCCCCACCTTTAATGAGCTTC/-------------------------- TACAACGCTTAATGTCACTCTG GATGAAGCATCACTATTTTCAGT 301 275 2 11.88 13.10 bhP28 cb25.fpc0011 Deletion 22 TTTCAAAATTTCAAAATTTCAA/---------------------- ATCAGGATTTCAGAATCATTAAG ATTTTTCCAAAATTCTGTGATG 249 227 2 11.88 13.10 bhP32 cb25.fpc0011 Insertion 21 ---------------------/TTTCGAAAGTGGGCGGAGCCT AGCTGATACAAATCCTTCTTCA TATCCGATTTTTGAGATACAAAG 250 271 2 11.88 13.10 cb-s16 cb25.fpc0011 Insertion 7 -------/CATAATT TTTTCGAAATTTCTTAATGTTTC TTTCATTGTGACTGGTAATATTGT 298 305 2 11.88 13.10 cb-s17 cb25.fpc0011 Deletion 8 GAGAGAGA/-------- AAATGAATTTTAGTATCGAAATCTG CTTGTTTTTCCATTCAAACTTAT 305 297 2 11.88 13.10 cb-s18 cb25.fpc0011 Insertion 8 --------/CTCCTCTA GGCCTAGAATGTGGAACTATC GAGGAGTGAGAGAGTTAGGTCAT 296 304 2 11.88 13.10 cb-s19 cb25.fpc0011 Insertion 10 ----------/CCTAACTCTC GCCTAGAATGTGGAACTATCTCT TGAGAGAGTTAGGTCATAGAGGA 289 299 2 11.88 13.10 cb-s20 cb25.fpc0011 Insertion 15 ---------------/GTCGATTTTTTAGAA GGCAAAAACTCCAATAATAATC CCCCTCATTTTATTATTCTCTCT 305 320 2 11.88 13.10 cb-s21 cb25.fpc0011 Insertion 29 -----------------------------/CTCAGAATCTGAAACTCTCAAAATCACAG AGAAATAAAACATTCACTGAAAAA CGTGATTGCAGTGGTTAAAT 369 398 2 18.17 18.17 cb-s72 cb25.fpc0072 Insertion 10 ----------/TGACTATTTC CAATTTTAGACAGATTACAGATCAA ATGGACTATGGCAAGTATTGAA 299 309 2 21.28 26.58 bhP21 cb25.fpc0058 Deletion 20 ATTTGATAAAATGATAAACA/-------------------- TGAAAGATATCAAATTTGTGTTG TGAAATGTTTGTAGTAAGGAAGAA 251 231 2 21.28 26.58 cb-s51 cb25.fpc0058 Deletion 7 ACCCCAC/------- AACTGACCAACTGAATGTTTTAC AGTGTGAGTTGCTTATCGTTTC 299 292 2 21.28 26.58 cb-s52 cb25.fpc0058 Deletion 7 CTGTGTA/------- GTTAGCGAAAACGAAACTATATG CTCTCTCCCTTTTCAGTGAGTA 297 290 2 21.28 26.58 cb-s53 cb25.fpc0058 Deletion 7 TTNNNNT/------- GTTACTGACAACGATGTTCCTAT ATCAAAATTCCTAGAGTCCCTAC 299 292 2 21.28 26.58 cb-s54 cb25.fpc0058 Insertion 7 -------/GCCCACC TGAGAGTGACCGTAACCTGT CGAAATGTGTTATGAAATGAAT 338 345 2 21.28 26.58 cb-s55 cb25.fpc0058 Deletion 9 AAAAAACGA/--------- AACTCACAGCTTACACACAGC CGTTGACTGACAATCATACTTT 398 389 2 21.28 26.58 cb-s56 cb25.fpc0058 Deletion 10 TCTCTCACTG/---------- AACTGACCAACTGAATGTTTTAC AGTGTGAGTTGCTTATCGTTTC 299 289 2 21.28 26.58 cb-s57 cb25.fpc0058 Insertion 10 ----------/TATTTGAAGC TGAGAGTGACCGTAACCTGT CGAAATGTGTTATGAAATGAAT 338 348 2 21.28 26.58 cb-s58 cb25.fpc0058 Insertion 11 -----------/TTCTTTTTTCC GTTGAGTGAGTGACGATGAGTA CATTTTCTCAAAAACAAGAAAAC 298 309 2 21.28 26.58 cb-s59 cb25.fpc0058 Deletion 12 TCATAACATATC/------------ AGAAGAGGAAAACGAATTGAG CGACTACTGTAGGATCTGTGAAT 300 288 2 21.28 26.58 cb-s60 cb25.fpc0058 Deletion 17 CTTTCTGTATTTTAGGC/----------------- GTCAGTGGAGCCAATACTAATAA CTTGTATTTAAAACCCCAAAAAT 298 281 2 21.28 26.58 cb-s61 cb25.fpc0058 Insertion 20 --------------------/TTTATTTCTGTTTGAAAATA AAAAGACCAAATCAGGGATTA CTATGTTCCACGGAAAGTTAAG 273 293 2 21.28 21.28 cb-s195 cb25.fpc2888c Insertion 7 -------/GATTTTT TGTAATGTAGGGAATAAAGCTGAT TTAGACATTTTCCACAGGAATC 301 308 2 27.92 33.95 cb-s333 cb25.fpc4206 Insertion 7 -------/TCTCTTA CCCACTATTCAGTTTGAGATAAA CAAACTTGTTAGTTTTTCCACTT 302 309 2 27.92 33.95 cb-s334 cb25.fpc4206 Deletion 8 TTCTCACG/-------- AACTCAATTATATGAACACATGACA AATGTATGATCCTAGTTGCACTT 294 286 2 27.92 33.95 cb-s335 cb25.fpc4206 Deletion 11 TTTTCTTTCTC/----------- AAAGCCTATTCAGCTATTCTTCT ATGTGAAATAGGCAGATATTGAT 298 287 2 27.92 33.95 cb-s336 cb25.fpc4206 Deletion 15 AATTTTCGAATTTCT/--------------- AAACACACACTGGTAACAAAAA ATACGGATTTGGCAAGAACT 390 375 2 37.94 37.94 bhP44 cb25.fpc1402a Insertion 12 ------------/TTTTTTTTTTTT TAAACAAACGGAACCTTTAGAC TTCATAAGTTTCGAATAAAAGAGA 312 324 2 37.94 37.94 cb-s125 cb25.fpc1402a Insertion 8 --------/CTTCCCGA AGTTCCATCCAGTTACAAAGAAT AAAAGGAAGAGAGATTTTGAGTC 299 307 2 37.94 37.94 cb-s126 cb25.fpc1402a Deletion 10 AATTTTAGAA/---------- AAATGGGTTTTCAGATTATTCAT ATATTGCAACACTTCACTGATTT 301 291 2 40.41 40.41 cb-s156 cb25.fpc2260 Insertion 7 -------/AAGGATC ATCATTTTAGGTTGTTGATTGAA AGTCTTGCTACAGACTAATTATGAAA 301 308 2 46.13 46.13 cb-s328 cb25.fpc4181 Deletion 21 GAGTACATCCCCCTTGAGAGA/--------------------- TATACGTTTGTCATTCCCAGAT TAGCTACTCAGTTGACCATTTTC 300 279 2 46.73 46.73 cb-s389 cb25.NA_155 Insertion 7 -------/AAAAAAT AACGTATGGATCAATGCTTAAC ATTCCAGGAAAATTGAAAAATAG 290 297 2 46.73 46.73 cb-s390 cb25.NA_155 Insertion 10 ----------/TGTTTTGAGC ATACAGTCCGTACAGGCAATAG AGAAAACGGACAAAAAGTTG 290 300 2 49.96 49.96 bhP8 cb25.fpc0305 Deletion 18 ATGTGATAATTTCAGCAG/------------------ GAAATTTACGTGAAAATCTCAAA CGAAACTACTAACAAGTGTTCAAG 249 231 2 49.96 49.96 cb-s102 cb25.fpc0305 Insertion 7 -------/TGGAGAA AAATAGCAGAGAGGGTAAGTGAT TAAGGGTAGTTAGAAGCTGGATA 301 308 2 49.96 49.96 cb-s103 cb25.fpc0305 Insertion 9 ---------/CTAGAGAAC AGAGAAATTGACAAGACAAGAGA CAAAATGTCGTAAGTCGAATAAT 295 304 2 49.96 49.96 cb-s104 cb25.fpc0305 Deletion 10 AACTTCTAAA/---------- CTTGGAAATCCTAACAGAAAAGT CACACAACTATACAAAACCAACA 297 287 2 49.96 49.96 cb-s105 cb25.fpc0305 Deletion 10 TTAGAAGTTA/---------- GATTTTCGGAACTTTCAATAGAT AACGTACGATAAACAAGAATACG 297 287 2 49.96 49.96 cb-s106 cb25.fpc0305 Insertion 17 -----------------/CCTCTTCTAACTTTAAG TCTCCTAAATTTAAGCTTCTCCT CTAACCATACCATCCTAAATCAG 300 317 2 49.96 49.96 cb-s107 cb25.fpc0305 Deletion 22 CGAAAATTAGCTGTGAAGTTTT/---------------------- AATTTTGCTCATAAATAGGAAGTT TCCTTCTATTAGTGTATACGGTAGG 275 253 2 ~10 ~10 bhP6 cb25.fpc0071 Deletion 11 AAGCTTCCATAGTCAAAAACAG CAATAATAGCCGAGAAAAATATG 973 962 3 0.00 0.00 bhP18 cb25.fpc4010 Insertion 8 --------/AATTTTTT GTCTAGTCAAACTTCCGATTTTC ATGAAGTATTTGGAAGGTGTGTA 248 256 3 1.23 1.23 cb-s246 cb25.fpc4030a Deletion 7 CTCTTTA/------- ATATATTTTCTCATGACACCTTTTT CACAAATGCTAGTAGGTCTTTTT 298 291 3 1.23 1.23 cb-s247 cb25.fpc4030a Deletion 7 GTGGTGT/------- TCGTGGTGTACTGTATTTAGGAT TACATTTTTGGTTGTCTTTGTTT 300 293 3 1.23 1.23 cb-s248 cb25.fpc4030a Deletion 8 TTTTCTCT/-------- TTACTCTTGAAATTTTTGCTTGA TGTATATAAAACATTGGTGTCTCC 291 283 3 1.23 1.23 cb-s249 cb25.fpc4030a Deletion 8 CCCCCCCC/-------- CTCGAGGAGTTGAACTTGTG AATATTGAAGCTAGAAAAGCTAGAA 297 289 3 1.23 1.23 cb-s250 cb25.fpc4030a Insertion 8 --------/TTTTTGAA TACATTTTCCCAATTATTACACC GTTTCCTTTAGAAACCAACTTGT 297 305 3 1.23 1.23 cb-s251 cb25.fpc4030a Insertion 8 --------/GGGGGGGG TTACTCTTGAAATTTTTGCTTGA TGTATATAAAACATTGGTGTCTCC 291 299 3 1.23 1.23 cb-s252 cb25.fpc4030a Deletion 9 CCCCCCCCC/--------- GTCTGGACAGGATAAATGTGAT CGTATAAGAACGCTTGAAGAAT 296 287 3 6.07 6.07 cb-s14 cb25.fpc0010a Deletion 14 CTTTTGGAAAACAT/-------------- AATCCATAAAATAGCTACAGTAACC ATTTTGGGGAATTATTTTGAA 299 285 3 6.07 6.07 cb-s172 cb25.fpc2587 Deletion 8 CAAAAAAC/-------- GAATTGTCGTAAAGTTTGATGTT TTTCGATGTCTTACTGTAGTTTTG 294 286 3 6.07 6.07 cb-s173 cb25.fpc2587 Deletion 10 TTCCCGTGCT/---------- ATGATGCATGGATTAGGAGAT GATACGAATGGAACGAAAATAG 298 288 3 6.07 6.07 cb-s174 cb25.fpc2587 Insertion 10 ----------/AAAAAAAAAA CAGAAAATTTCAGATTTACAAAAA TTTCCACAGTTTTAGACCTACTG 223 233 3 6.07 6.07 cb-s175 cb25.fpc2587 Insertion 11 -----------/TCGAAAAAATT TTCAGACTATTTTTCTTGATAAAGTT GAAGAAAAGAAAATTGGAAAAA 313 324 3 6.07 6.07 cb-s176 cb25.fpc2587 Deletion 13 TTGGTGTTTGCGG/------------- ATGATGCATGGATTAGGAGAT GATACGAATGGAACGAAAATAG 298 285 3 6.07 6.07 cb-s177 cb25.fpc2587 Deletion 18 GGGGTTTTTAGGTTCTGG/------------------ GGATATTTATTGAAAAATTTGATTC CATAGATACCGCTTCTAGAACAT 299 281 3 6.07 6.07 cb-s178 cb25.fpc2587 Insertion 21 ---------------------/TTTTTCCAATTTTCTTTTCTT TTCAGACTATTTTTCTTGATAAAGTT TTTAGAGTGAGAAACATGGATTT 340 361 3 12.46 12.46 bhP14 cb25.fpc4153 Deletion 22 GAGAGAGAGAGAGAGAGAGAGA/---------------------- GAGCTCTAATACAGGCAGAAAG CTAGAGTGACCATTAAACCAAAA 241 219 3 14.30 14.30 cb-s364 cb25.fpc4341 Insertion 7 -------/GTGTGTG CTTTGTTTCGTTTCAGTTGAT GTAACAGGAAAAGTTTGGAATTT 302 309 3 14.30 14.30 cb-s365 cb25.fpc4341 Insertion 9 ---------/TTTTTCGAC CAGCTAAAAATGGTCAAAAATC GTCAAAAACTTTGAAAAATCAAT 302 311 3 14.30 14.30 cb-s366 cb25.fpc4341 Insertion 16 ----------------/CAAGAGTGGGCGGAGC AAACATTGTTCTGGAACTACAAA AATTTTTCGCTGAATTGTTTT 300 316 3 14.30 14.30 cb-s367 cb25.fpc4341 Insertion 22 ----------------------/TTTTCAGCCCAAAAATCTGAAA GCGGAGCTAGTACATTTAACAC AAAATCTGGAAAAATCTGAAACT 296 318 3 14.94 16.26 cb-s287 cb25.fpc4069b Insertion 11 -----------/CAAGCTTGCCG AATTGTACCTAACTGGAGGATTC TTAAGTCGATTTTTGAGATTTTT 300 311 3 16.84 17.45 bhP38 cb25.fpc2187 Insertion 44 --------------------------------------------/AAAAGTTCATTTTTAGGTTCAATTTTTCATTTTTAGGTTCAATT GGCGATTTTGTTAGTTCAAA AATTCAGGTTCTTACAGGGATAC 249 293 3 16.84 17.45 cb-s148 cb25.fpc2187 Insertion 9 ---------/AAATTAAAA TTTCACTAAAAACTTCCGAATC GCACTTGAGTGTGTTTTAGATG 224 233 3 16.84 17.45 cb-s149 cb25.fpc2187 Insertion 10 ----------/CATATTTTAA AAAATAATGTGCACTTCTCTCC CACTTTCTTTTGAAATCAGACAT 299 309 3 20.02 20.02 cb-s80 cb25.fpc0103 Insertion 7 -------/ACTTGAA CAAAATTTCGATTCTTTTCTAGTT TTGAAACTTTGTGGATTCAAG 300 307 3 20.02 20.02 cb-s81 cb25.fpc0103 Deletion 10 AGCGGCCGGC/---------- CAAAATTTCGATTCTTTTCTAGTT TTGAAACTTTGTGGATTCAAG 300 290 3 21.77 21.77 bhP12 cb25.fpc2976 Deletion 29 ATTTTAATTTTCAGAGGTGATTCCGAATC/----------------------------- TTGCTGCAGGTTTATATCACTA ACTTGAAGATCTGTTGACTGGT 248 219 3 21.77 21.77 bhP34 cb25.fpc2976 Deletion 7 ATTCAGT/------- ATGTGGAATAGACGGATCTAACT TGCATTTTAAAAGGAAGATTGTA 246 239 3 24.22 24.22 cb-s155 cb25.fpc2234 Insertion 8 --------/GCGATGCC GATCTACGAAATGCTGAAAAAT ATGAAAAAGGACAAGAAAAGAAC 299 307 3 24.84 24.84 cb-s268 cb25.fpc4044a Deletion 7 GAAGATG/------- ATTTCTTTATGGCTAATCCATTT CTTCTGTCTTTTGTCTCCTGTT 294 287 3 24.84 24.84 cb-s269 cb25.fpc4044a Deletion 7 TTTCAAT/------- ATTTCTTTATGGCTAATCCATTT CTTCTGTCTTTTGTCTCCTGTT 294 287 3 24.84 24.84 cb-s270 cb25.fpc4044a Deletion 8 GTGTGTGT/-------- TGGAGTTACGGTATCTATTCTGA AATATATGATCTGCCTCTTTTGA 300 292 3 24.84 24.84 cb-s271 cb25.fpc4044a Insertion 10 ----------/TCAAAGTGAA TGTCTCGAGAAATTAGATAGTGG ATGTGATAGAGACCAATTTTGAG 297 307 3 24.84 24.84 cb-s272 cb25.fpc4044a Deletion 17 TCCAACAATCACTGTAT/----------------- TAGTTTTTAACTGCTCCAGAACT TGTATGGAAGTCTTTTGAAGAAA 300 283 3 24.84 24.84 cb-s291 cb25.fpc4079 Insertion 8 --------/CCAGAGTA AGTTGTAAAGCGAAAATAATACTGT ATCTTTCACTCGTTTTCTTGTT 300 308 3 24.84 24.84 cb-s292 cb25.fpc4079 Deletion 9 AGCCATTAT/--------- TTTTTCTTCGTTAAAGGACATT CCAGGTAAAAGAAAAACAGAAAT 287 278 3 26.85 26.85 bhP39 cb25.fpc0201 Insertion 13 -------------/TATAAGGAGAGAA GACAATTTGGAGCTCTTAGAAA ATGATTTCGTTTCATATGCTAAA 250 263 3 28.76 29.34 cb-s150 cb25.fpc2193 Insertion 7 -------/GATCCTA TACTGATTCTTTCGTTTTGATTT AATGTTCCATTTTCCATTAGTTT 300 307 3 31.14 31.14 bhP40 cb25.fpc0002 Insertion 20 --------------------/AAATTTTGATAACTTAAATG CAAATAGCCCATGAGATATAAAC TTGATATATTTGAGGTTTTTGAGA 250 270 3 31.14 31.14 cb-s1 cb25.fpc0002 Deletion 7 TTAAAAT/------- ACAAGCACCAAATAAATTTTACA ATCAGGAAGAGAAGAATCAGAAT 300 293 3 31.14 31.14 cb-s2 cb25.fpc0002 Deletion 7 TAGTTTA/------- GTTGTGGACCAAATAGTAGAGC ACTTGCCTTAGCTTCATACG 366 359 3 31.14 31.14 cb-s3 cb25.fpc0002 Deletion 11 GAAAGGAAAAT/----------- CTATGTTTGCTTGTGTGAGTTTA ATTTTCAGCAACAGAAATGACT 300 289 3 31.14 31.14 cb-s4 cb25.fpc0002 Insertion 13 -------------/AACTCGCAGCTCG TCATCTCCATTCTGAGTATGATT GCTTGTTTCAGCGTTCTATACTA 299 312 3 31.14 31.14 cb-s5 cb25.fpc0002 Deletion 16 TTTTTTTTTTGTTCGG/---------------- TGCAAGAATTAGTGAAACTCTGT ATCGATGAATAATGTGTCAATTT 298 282 3 32.42 32.42 cb-s183 cb25.fpc2887c Deletion 14 CCGGCCCACATTTT/-------------- ATTTTCTTAGAGGGAAATTCAGT AGAGCACTTTTCTAGATTTGAGAC 300 286 3 32.42 32.42 cb-s184 cb25.fpc2887c Deletion 19 AGCTCATTTTGGGCCAATT/------------------- GACTACGAACTACAAAGCCTACA AGAGGATATGGACAAATTGTTG 298 279 3 36.53 36.53 bhP10 cb25.fpc4224 Deletion 11 TCTGGAAGTTT/----------- GTTTTTCCAGATTTTTGTGTACT TAGAATGTCTCCTTCATTCATTT 249 238 3 36.53 36.53 cb-s338 cb25.fpc4224 Deletion 7 GAGGGGA/------- TAACTTCCTTTTGAAACCTATCC TCTTTTAGAAATCCAAAATTCAA 299 292 3 36.53 36.53 cb-s339 cb25.fpc4224 Insertion 7 -------/GCTGATT GCGTTGTCTGTAACTGTATGTAA GTCTGACTGCCTCTTAACTTTG 289 296 3 36.53 36.53 cb-s340 cb25.fpc4224 Deletion 8 TTATATAT/-------- TTTTCCAATTGTGTTAGAGAGAG TGTACTCACCTTTAAAAGAAATCA 299 291 3 36.53 36.53 cb-s341 cb25.fpc4224 Insertion 8 --------/GAATTTTT GCCTAACTAAGGGATTTCTAGG TGCTTCTTTCCATCGATATG 293 301 3 36.53 36.53 cb-s342 cb25.fpc4224 Insertion 10 ----------/TCACTGAAAA ATCGAGAAAATCATTCGAGTC AAAACCCGATTTTCAACATT 214 224 3 36.53 36.53 cb-s388 cb25.NA_132 Insertion 12 ------------/GACCGCGCCGCT ACTTAGTTAGTTTCCCGAATTTT AACCCTTTAAAACGGATTATTT 290 302 3 39.93 39.93 cb-s379 cb25.fpc4426b Deletion 8 GATACCTT/-------- CGCTTTTATTTTTCATGATTTT ATCAGCTAATTTTCCATACTTGA 346 338 3 39.93 39.93 cb-s380 cb25.fpc4426b Deletion 15 TATATATATATATAT/--------------- GCAATAAGTCAAAAGAATTCAAC TCGATCTTTTGTCTACTCTTCTG 300 285 3 40.51 41.06 cb-s240 cb25.fpc4013 Deletion 11 TCAGGGCCCGG/----------- TAGCCTAACTTTCAAGATTCCTA TTATTCACATTCTTCATGGATTC 300 289 3 41.69 41.69 cb-s387 cb25.NA_102 Insertion 17 -----------------/TATGGGTCTCGTGAAGA CAGGTCGAAAAAGTGAAAAA AACAATTCTTTCTTCACGAGAC 298 315 4 2.56 5.10 bhP13 cb25.fpc3752 Insertion 14 --------------/TTTTTGGATTTCTC AGTTTTCTGTGAGTGATGAGTTC TTGGTGACGAAAAATTAATAGAG 250 264 4 2.56 5.10 cb-s212 cb25.fpc3752 Insertion 8 --------/AACTCCAC AAAATTATTTATCAGGCAGAACC TAATATGGGAACAATTCAAACAT 300 308 4 2.56 5.10 cb-s213 cb25.fpc3752 Deletion 18 AAATTTTCCTCAGGCCCG/------------------ AGGCAAAATTTCTGAATAAAACT TCTCTGAAAATTGATAGTTACGTTAT 377 359 4 2.56 5.10 cb-s214 cb25.fpc3752 Insertion 29 -----------------------------/CATTAAATTTGGAAATCAAAGTTTTGAAA TTCGGTACTATTTTCAGGAGTTA TCAGTAGAGAGCATTTGAATTTT 299 328 4 7.88 7.88 bhP15 cb25.fpc4250 Insertion 20 --------------------/CAAAATTTTTGAAATTTTTT TTTTTAAGAGTCCTGTCATTTGT AATGAAAGTTCGGGTAATTTTT 250 270 4 7.88 7.88 cb-s344 cb25.fpc4250 Insertion 12 ------------/AGAGAGAGAGAG TGAATTTCATACCTCTAACCATAG GACATTGAACGACATCTAGACA 297 309 4 7.88 7.88 cb-s345 cb25.fpc4250 Insertion 15 ---------------/GATTGGGCAAAGCGG ATGAGCAATATGAGATTCAAGAG CTTTCTTCTCGTATGGAAATCTT 296 311 4 7.88 7.88 cb-s346 cb25.fpc4250 Insertion 16 ----------------/GCCCTTGGACCGCCCC GATGAGGTCAGTTGTTGGTC CATATCTTGTTCACAACCTAAGC 302 318 4 9.19 9.78 cb-s305 cb25.fpc4118 Deletion 8 AAAATTAC/-------- ATGATCAAATTTATTCAGAAATCA CAAAATTAAAAGGAATGATTCAA 299 291 4 9.19 9.78 cb-s306 cb25.fpc4118 Deletion 11 CAAAATGTTTT/----------- TTAAAAATAGCCAAATGAAACTG GAGTAAGCCTAACAATTGAGGTA 262 251 4 12.26 12.26 cb-s370 cb25.fpc4382a Insertion 20 --------------------/ATGAGCTTTGGATTTTCGAA TCAGAGATTTCACTTCTAACTGG TCAAACAATAGTGATTCTTGAAA 301 321 4 12.26 12.26 cb-s371 cb25.fpc4382a Insertion 36 ------------------------------------/AAAAAATGTTGTATTTTCATTCCGGAATTTTTGCAA TCTAGTGCATGTGTACGAAAATA CAATTGATTACGACAAAGTCAG 297 333 4 12.93 13.56 cb-s231 cb25.fpc3857c Insertion 7 -------/CATATAT AAGCAACTTGAAATTCTACAAAA TTCATATTTGGCAATCAATTTAC 300 307 4 12.93 13.56 cb-s232 cb25.fpc3857c Deletion 8 TAAATAAA/-------- ATGTTGGAACTTAATCAGATGTT TCATATTCTCCTAATCTGGTGTT 316 308 4 12.93 13.56 cb-s233 cb25.fpc3857c Deletion 8 TAAAAACT/-------- GCATTAGTTTCATTGTCAAATTC TTATATTTCTTAAACGGCAAAAA 297 289 4 12.93 13.56 cb-s234 cb25.fpc3857c Deletion 9 AAGACCCAT/--------- GAAGGTAGTTTGATACCATTCAA GAAGATGAAGAGTTTGGAAAAAT 297 288 4 12.93 13.56 cb-s235 cb25.fpc3857c Insertion 9 ---------/AAAAAGCAA TCTGTTGCCTATAATTGTTTCTC TTTGTGCCATACTTTTGTAGAAT 300 309 4 12.93 13.56 cb-s236 cb25.fpc3857c Insertion 10 ----------/ATTGTTATAG AAAAAGATGGAAATAAGGATACG TTCTGTTTTGAATATTTTCCACT 300 310 4 12.93 13.56 cb-s237 cb25.fpc3857c Insertion 10 ----------/ACTGGTACTG TGTAACGGTGTAGAATTTGTGAT AAGATTTGTGAGAAGAGAGATGA 300 310 4 12.93 13.56 cb-s238 cb25.fpc3857c Insertion 20 --------------------/AGAAAAAATTCCAAGCAGTT AAGCAACTTGAAATTCTACAAAA TTCATATTTGGCAATCAATTTAC 300 320 4 12.93 13.56 cb-s239 cb25.fpc3857c Insertion 21 ---------------------/AAAAAAAGCATTGAAATAGCA TCTGTTGCCTATAATTGTTTCTC TTTGTGCCATACTTTTGTAGAAT 300 321 4 12.93 12.93 cb-s372 cb25.fpc4382c Deletion 9 ACGATTTCA/--------- TGGTGAGGAAATCTTTACTGATA ATTGCAATTAAGAAGGAATCTG 300 291 4 17.62 17.62 bhP45 cb25.fpc4260 Deletion 20 TCACCATTGAACCAATCTAA/-------------------- AAATCAAATTGTTTAAGACACAAA CAGATAATTGTCTCGAGTTCTTT 245 225 4 17.62 17.62 cb-s347 cb25.fpc4260 Deletion 7 AACGGGG/------- TGTTTCTGAGTACTTTTGTGACTT TTTTATTTCCCCTCAAAAATC 341 334 4 17.62 17.62 cb-s348 cb25.fpc4260 Insertion 8 --------/CCAAAAAC TTCGTAATAGGTTTCATCTATCAG GATTTGATTTCACGAAGTATTGT 301 309 4 17.62 17.62 cb-s349 cb25.fpc4260 Insertion 9 ---------/TCGGAAAAT GAAATCAAATCATATTGAAAAATTC AGGAAGATGTGTTCAGAGAATAA 301 310 4 17.62 17.62 cb-s350 cb25.fpc4260 Insertion 20 --------------------/GTGCTTATAAATAAAATGTA AATCGGTTATGTTTCTAAAAATTC TGTCGAATCTGAACTTTCTTCTA 298 318 4 17.62 17.62 cb-s351 cb25.fpc4260 Deletion 22 CAAAGTTCATCCTAGAACTCAA/---------------------- CTTCATCAGTCTCCAGAAAAA TTTGAAAATGAGTAATTCAAACA 300 278 4 18.20 18.87 bhP4 cb25.fpc0039 Deletion 9 TGAAAACTC/--------- ACCCTGAAGTTTTAAATTTTGTT TTTTTCTCTCCATCTCTTTTTCT 250 241 4 18.20 18.87 cb-s38 cb25.fpc0039 Insertion 7 -------/ATCGTTA CAGGCAAACAATCAAATTATCTA AGTTTAAGCGTTAGGAAAAAGAG 298 305 4 18.20 18.87 cb-s39 cb25.fpc0039 Insertion 8 --------/TCTCTCTC AACACAAAAACACAAAATCAACT ACCCTTCATCTTATTCTTCAAGT 299 307 4 18.20 18.87 cb-s40 cb25.fpc0039 Insertion 21 ---------------------/AAACGGTTAGTTGTAGAACAA TTAGGTTTCCAGACCATCAAT ACAGTTCTCTGTTTGTTCTTCAG 332 353 4 18.20 18.20 cb-s85 cb25.fpc0110 Deletion 7 GGTAAAT/------- AAAATTAATTACCGTTCACAAAA ATTCTTATCGATCTAGGTGGTTC 300 293 4 18.20 18.20 cb-s86 cb25.fpc0110 Insertion 7 -------/CATCTCT TCAAACTTATCAATAACGATGTTT TTAAGCTGAGAATGAAATTTTTG 301 308 4 18.20 18.20 cb-s87 cb25.fpc0110 Deletion 10 ATCAATTGAA/---------- TGTAATGCTTTCCAAATTTTTAT CAAATTAGTCCGTAATTGTTTTT 300 290 4 18.20 18.20 cb-s88 cb25.fpc0110 Deletion 16 TGAAAAAAAAAATTAG/---------------- TGCATAAATAAGAAGTGACCTAGA AGAACATCATAAGAATGGGTTTA 300 284 4 18.20 18.20 cb-s94 cb25.fpc0143 Deletion 7 TTACATT/------- TAAACGAGAGAAAGAGAGTCAGA CAAGTTTTGAAAGCAAAGAAATA 243 236 4 18.20 18.20 cb-s95 cb25.fpc0143 Deletion 8 GATATTTA/-------- TCTTTTTCGAAATAAACACTTTT GATATTGTAGGATTGGACTACCA 301 293 4 18.20 18.20 cb-s96 cb25.fpc0143 Deletion 11 CGCTCAGAAAT/----------- TGAGTTTACTTTCGTTTTTCTTG GTTGCTACCAGCTGAGCTAT 297 286 4 18.20 18.20 cb-s97 cb25.fpc0143 Insertion 11 -----------/CAAACCGATGA AAAAGCAAGTTTGAAACCTAATA GAGCTCATCGTGAAAGATATAAA 300 311 4 18.20 18.20 cb-s98 cb25.fpc0143 Insertion 14 --------------/TGTATGTGTGAGAG TATTCCTGTTTCATCTCATCTTC GAAATGAAAATTCTTGAGTCGT 300 314 4 18.20 18.20 cb-s320 cb25.fpc4152 Deletion 8 AGTTTTTT/-------- TGAAGAAATGAAAGTACAAAAATG CCAGAACTATGCCTATTGTTTC 300 292 4 18.20 18.20 cb-s321 cb25.fpc4152 Insertion 8 --------/TCTTCATT TTTTAGAATTCAAGGAAGTGTTG TCTTTTCAAAGTTCTGACGTTAC 299 307 4 18.20 18.20 cb-s322 cb25.fpc4152 Insertion 8 --------/AACACATG CTTAGTCCTTTGAAACCCTTACT ACAAAAGACTATCATTGGTGTGT 301 309 4 18.20 18.20 cb-s323 cb25.fpc4152 Deletion 28 CGTTTCTTCAAAATATCTGGACCCCACT/---------------------------- TTAAAAACTGCAATTCTACACAA AGGTTCACGAGCTTCAATAATA 288 260 4 20.02 20.02 bhP9 cb25.fpc1570 Insertion 16 ----------------/ATCATCCAAAAATCTA TCTCGCATACCTAATGAATTG AAATGCCTAACTTTTCAAAATC 256 272 4 20.02 20.02 cb-s134 cb25.fpc1570 Deletion 7 AGCCATT/------- CGCATAAAAATTCATTTATCTTAC ATCGAAAATTGGTTTTAAAAGTT 290 283 4 20.02 20.02 cb-s135 cb25.fpc1570 Insertion 7 -------/GTAAGAA AGAAAATAGGAGGAGGGAGATA TTTTGAGTTTTCTTGTCAGTAAGA 299 306 4 20.02 20.02 cb-s136 cb25.fpc1570 Insertion 7 -------/TAAAAAA GAAAATTCGAAAATTTTATGGTC TCAGTTCAAATTTCTTCTAGCTC 300 307 4 20.02 20.02 cb-s137 cb25.fpc1570 Deletion 10 CACCTCCAAC/---------- GACTTCACAGAAAATGTTCAACT TTTTTCTTGCTCCAGAATCTT 292 282 4 20.02 20.02 cb-s138 cb25.fpc1570 Deletion 15 CTGCTGGCCTACGTT/--------------- GACTTCACAGAAAATGTTCAACT TTTTTCTTGCTCCAGAATCTT 292 277 4 20.02 20.02 cb-s139 cb25.fpc1570 Insertion 16 ----------------/CATATATACAAATATA TGAACTGTTATCAGCTTACTTCA GATGACGAAAAAGAAATGATTC 300 316 4 20.02 20.02 cb-s140 cb25.fpc1570 Deletion 17 GAGAAAATAGGAGAAAC/----------------- TTTTCTCCATCATATACAACTCAA AGTATCCATCCCCTATCTTCTC 291 274 4 20.02 20.02 cb-s141 cb25.fpc1570 Insertion 18 ------------------/TCTATTGATCCTTCTCTT TTGTTGTCATCTTTCTCTCTTTC AACGGAAATTGAATCAAAACTAT 298 316 4 20.02 20.02 cb-s142 cb25.fpc1570 Deletion 19 AATATGAAAATGCCAAAAA/------------------- CCAATTAAATGCTTGTGATTTTA CAAGCTACTGATTCTTCCAGAT 287 268 4 20.02 20.02 cb-s143 cb25.fpc1570 Deletion 26 ACCGCGCCGACCGACCGCGCCGACCG/-------------------------- AAGAAAATAGAAGATGAGAAGAGG CCGAATTTTTGTATTGTGATTC 300 274 4 20.02 20.02 cb-s163 cb25.fpc2374a Insertion 9 ---------/TAAAAAAAA GAACCAAGAAGTTTCGATTAAA TAAATGGTAAAATTTCAGACGAT 299 308 4 20.02 20.02 cb-s289 cb25.fpc4069d Deletion 7 TGTATAC/------- TCAAAAATAGACTTCCAGCAGTA CTTTGTTCTTGTCTGTGTCTACC 300 293 4 20.02 20.02 cb-s290 cb25.fpc4069d Insertion 11 -----------/TCGTCGCCCGC CATCGATCTGAAGATGTTTTATT AGTGTCAATGAATACGGATATGT 300 311 4 20.60 20.60 bhP11 cb25.fpc4090 Deletion 18 CCACACTTTATTAGTTGA/------------------ TCAATTATCTTGGTTCCTATGAG AGCTTGTTAATTATCTTGGTTCC 251 233 4 20.60 20.60 cb-s302 cb25.fpc4090 Deletion 7 TTTTTTA/------- TTGCTTAAAAATTCTGAAAGTCT TTTTGTCACTTTTGTAGCAATTT 293 286 4 20.60 20.60 cb-s303 cb25.fpc4090 Insertion 13 -------------/TCAGCCGATTTTT GACCGAATTCAAGTTGTTTCTA CGTTTTTGTAGCCTTTTTAGAC 303 316 4 23.07 53.78 cb-s62 cb25.fpc0065a Deletion 12 ATTTGGTGGTTG/------------ ACACCATTAGGACTGACAGATT TGAAACGTTCAATTTCTGTG 253 241 4 23.07 53.78 cb-s63 cb25.fpc0065a Deletion 12 TTTTTTTTCGAA/------------ CCAGTTCTCAAGGAAAAACTC AATTTTCGGCTATTTTTAGCTC 300 288 4 25.51 25.51 cb-s313 cb25.fpc4132 Deletion 13 TTCTTCTTCGATC/------------- ATACCGTATCTTTTATCCCAATC GAACTTTGAGACTAAAGGGATCT 300 287 4 28.91 28.91 cb-s383 cb25.NA_087 Insertion 7 -------/CCAAAGC AATGATTTTATCAGCAAAAGTTG ACATGTCAAAGTTACAGCAATTC 302 309 4 28.91 28.91 cb-s384 cb25.NA_087 Insertion 7 -------/TTTTTAA CCGTACAATGATAGTATCCAAAG ACCAGAAAAATGAATACAGTACG 299 306 4 28.91 28.91 cb-s385 cb25.NA_087 Deletion 8 GAAATTTT/-------- AGTCTGTTTGAATGTGTGTTCA TTTATTGCGGTATCAAACAGTA 299 291 4 28.91 28.91 cb-s386 cb25.NA_087 Deletion 11 AGGAGCCTAGT/----------- CATAAAGTGGCTTTCTACGACTA TCATACTAAAATCGTAGCTAGTGC 297 286 4 29.53 29.53 cb-s337 cb25.fpc4217 Insertion 8 --------/TGTTTCAA TTTTTCACTTCAAAATTCAAATC GCATTTATGTGCTGTCAAAGT 298 306 4 30.96 30.96 bhP16 cb25.fpc0107 Deletion 21 TTTCCAGATTTTCAGCCAAAA/--------------------- CTAGTCGTGTTTAGGCTCATTT TTTTATCCAATTTTGTGTGTCTC 251 230 4 30.96 30.96 cb-s84 cb25.fpc0107 Deletion 16 CAGGGTCTTAACTTGA/---------------- GGCAATAAAGCTGTAAATTCAA GAAGTCGTCCAACTGAAAAATA 301 285 4 37.52 41.16 cb-s215 cb25.fpc3835 Deletion 7 AAATTTT/------- TAAAACCTTTAAAATGCCTGAA AAAATCAATTTTCTTTGTGAGAG 290 283 4 37.52 41.16 cb-s216 cb25.fpc3835 Deletion 7 AATACGA/------- AGTTCACCGATTTACAAACATT GTTGAGCTCACTATTTTGTCCT 378 371 4 37.52 41.16 cb-s217 cb25.fpc3835 Deletion 7 TTTTAAC/------- ACAAACTACACTTTCAACAATAAACT AAAACGAGAAATAATCTCAAAAA 310 303 4 37.52 41.16 cb-s218 cb25.fpc3835 Insertion 7 -------/AAGCTTA TTCTTTAGAGGATTCAGAAGGAT CTCTTGTTGTCACATCCAAATA 297 304 4 37.52 41.16 cb-s219 cb25.fpc3835 Deletion 9 TTTCAAAAT/--------- TAAAAGAACACTGAAAAATGGTC TTTGAAAATTATAAAATCCAGTTG 295 286 4 37.52 41.16 cb-s220 cb25.fpc3835 Deletion 11 TTTGAAAACCT/----------- GTATTGGGCTGCTGATACTAAA TTCTTACAAAATTTCAGCCAGT 298 287 4 37.52 41.16 cb-s221 cb25.fpc3835 Insertion 11 -----------/GCGGGTAATTA GAGAAAAAGTGGCTTAATTGAC AAATCGAATTTTCGGTCTTAAT 299 310 4 42.39 42.96 cb-s162 cb25.fpc2328 Deletion 7 CGCAAAG/------- AGTGTAGCTCATCCGACAAG CGTATTTCTCCTTGAGACTAGC 321 314 4 43.55 44.14 cb-s368 cb25.fpc4347 Deletion 8 GGGCGGGG/-------- ACTCTTTGGTATTAGCCTGAAAT TGGATTTCTATTACTGTGGTTTT 301 293 4 43.55 44.14 cb-s369 cb25.fpc4347 Insertion 8 --------/CTCTCTCT CGGAGGTATTGTATTTGAAGAT GTATGTAAATTTGGTTTGGTTTG 338 346 4 45.29 45.29 bhP30 cb25.fpc3052b Insertion 20 --------------------/CTCTCTCTCTCTCTCTCTCT AACACATTTCTTATATCGCTGAC AAAAATAGATTTAGGCTTACCGTAT 248 262 4 45.29 45.29 bhP46 cb25.fpc3052b Insertion 10 ----------/AGTTAGAAGA GTTCATTCGTCAAAGTAAAATTG TTCTCCTAAATTTAAGCTTCTCC 242 252 4 45.29 45.29 cb-s207 cb25.fpc3052b Insertion 7 -------/CTTAAAG TGAAATAGGTTATATCCAAGAGAAA GGCACTAATTTTTGTTTTATTTTT 302 309 4 45.29 45.29 cb-s208 cb25.fpc3052b Insertion 10 ----------/CATTTTATCA GAATTGTTGAGGTCCACTAAA TGAAAGGTGAGGTAGAAGACTAA 301 311 4 cb-s15 cb25.fpc0010b Deletion 12 AAATTTTTACCA/------------ TGGGTATTTTAAAGAATTCACAT AGAAGAAGATACAATATTCCAGAAA 299 287 5 0.65 0.65 cb-s168 cb25.fpc2454b Insertion 8 --------/AGGTTTTG GAAAGATCTTAATGTGAAGAATAAAG ATTGGGTCACAAACACTAAATC 398 406 5 0.65 0.65 cb-s169 cb25.fpc2454b Insertion 8 --------/CTTCCGAT TTAGTGATAGTATTGAAGCGAAAG CGAAAGTCAATTTTATTTGAAAC 347 355 5 0.65 0.65 cb-s170 cb25.fpc2454b Insertion 15 ---------------/GGGACCTGGCGGAAC TGAATTTTTGAAGGATGACTACT AATCTAATAGGGGCAGACTTG 396 411 5 0.65 0.65 cb-s171 cb25.fpc2454b Insertion 24 ------------------------/CTCTCCCAGAGCAAAGCTGCTCCG TTTTTCTTCAACTTTTCAATATCA TAGTCAGTGTCACCAGAGTAGC 297 321 5 1.90 1.90 bhP22 cb25.fpc4095 Deletion 14 CTTGGATGTATCAT/-------------- TATTTTGTTGGTACTTTGGTTTC GGATGGTTATCTCTCTTATCTCC 249 235 5 2.50 3.16 bhP31 cb25.fpc2114 Insertion 24 ------------------------/TCTAGAAGGGCCGCCAACCATCTC GGAGGTATCTTGGAACAATAGA TGACTTTAAGAGTTGTTTGGAAC 244 268 5 2.50 3.16 cb-s147 cb25.fpc2114 Insertion 7 -------/TCGGTAC ATATTCTATTTGAAACGGACAAA TATTGTGCTTCTCTTCAATTTTT 302 309 5 3.16 3.16 cb-s332 cb25.fpc4202 Insertion 7 -------/TTTTAAA CTGCATACCTAATTTGCTCTAAG TAAATAGATGGTTGGGATGATT 301 308 5 5.12 5.12 cb-s352 cb25.fpc4263 Deletion 14 TCAGCCTAAGTCAC/-------------- GCCTAAATCACCTACCCTATATT CTAATCAAATTAGTCCGAAAACA 300 286 5 6.38 6.38 cb-s361 cb25.fpc4334b Insertion 8 --------/CTCAATTC ATGAGTTTGGGGTGAAATTAG ATGTAAGTGGTTTTGAGAGGTC 292 300 5 6.38 6.38 cb-s362 cb25.fpc4334b Deletion 15 GAGTTTCTGGATTGA/--------------- CGTATTTGACATCCATCACAC GAAGAGTCGAAAGTTTGAAAAA 300 285 5 6.97 6.97 cb-s157 cb25.fpc2310 Deletion 7 CCATCCA/------- TTCACAAAACTCTTCTAGCAGTC ATTTTGTGATCTTTGTGAATCAT 298 291 5 6.97 6.97 cb-s158 cb25.fpc2310 Deletion 7 TTTTTTC/------- AAAAGTGAAAAACTTCAAATTCA CTTTCAAAGATATCGTCCAATAA 295 288 5 6.97 6.97 cb-s159 cb25.fpc2310 Insertion 7 -------/GAACCCA ACAAAAAGTTGAGCAAAGAAAC TAGCGAAAATGATTTCCATAAT 300 307 5 6.97 6.97 cb-s160 cb25.fpc2310 Insertion 20 --------------------/TTATCTTGGTTCTTTTAAAA TTTTTGCTCTTGAGCTATGC GAAAAATTCACCACGTAACAAT 298 318 5 6.97 6.97 cb-s161 cb25.fpc2310 Deletion 22 TGTACGGAGATGAGTAATTTCG/---------------------- GGCTTCTTTCAAAATAACATTCT TTGGTAATCTGGAATTAAAGTTCT 299 277 5 8.28 8.28 cb-s31 cb25.fpc0023 Deletion 9 GTTTTCCGC/--------- GCGCTTTTATGTATTAGTGGTAA CTTTTTCAGACAGCTTGTATTGT 298 289 5 8.28 8.28 cb-s32 cb25.fpc0023 Deletion 14 TGGAAAACGGAAGA/-------------- CATATTTCTGGAATTTTCTTCAA AAATGGATTAGTCGTCACAAAG 400 386 5 8.28 8.28 cb-s33 cb25.fpc0023 Insertion 14 --------------/TGATATATAAATCC TCCGTTGACAGTATTACAATTTC ATTCTTAAGAGGGTGTCACCTAA 300 314 5 8.28 8.28 cb-s34 cb25.fpc0023 Deletion 16 GAAAATTCGAACTTTT/---------------- GGTTGATGAGAAAACACCTATTA AATTTCATTTTGAACAAAACAGT 298 282 5 8.28 8.28 cb-s35 cb25.fpc0023 Deletion 16 TCAGAATCTCAGAATC/---------------- GTATAAACGCAACCTGTTCAA ACGTTGTTTTAAACTCTTTATCG 300 284 5 8.28 8.28 cb-s36 cb25.fpc0023 Deletion 23 TGTACTTATAAATGTTGAAATGA/----------------------- AAAATAAATTGGATTTTCTTCTCA CATGTAGTTCAAAACCAGAAAAA 297 274 5 8.28 8.28 cb-s37 cb25.fpc0023 Insertion 27 ---------------------------/ATAATTACCTTAACATTGTCCATCTTC AACACATTTTTCATGTCTCCTAA GTATTATTTGCGTTTTCATGTCT 300 327 5 9.65 12.36 bhP47 cb25.fpc2887a Deletion 21 ATCAAGCCGTGTGCAAGCATG/--------------------- TGGAAGTCTTGGACAAATATTAC TCTTCATTAAGTCTTGGGTATGA 243 222 5 9.65 12.36 cb-s181 cb25.fpc2887a Insertion 7 -------/CATAAAG TGGAACTTTTTGGATTATTAAAG GTGAATCAAATTGAGGATTTTT 303 310 5 9.65 12.36 cb-s182 cb25.fpc2887a Deletion 19 AAAAAATATGGTATAAAAA/------------------- AAGCTTCAGAATATATCATTAGAAAA GTGTATGTAACACTTTTGCTCCT 291 272 5 16.41 16.41 cb-s144 cb25.fpc2051 Deletion 8 GATTTGCT/-------- CTATTGATTCATGGCGATTTA GAGAATGTGATGTTGAAGTGATA 286 278 5 16.41 16.41 cb-s145 cb25.fpc2051 Deletion 12 AAACATGTTTTA/------------ TTTTTGGAGTTATGTTTTGTGTT AGATTCAGATGATTTTGAGTTTC 303 291 5 16.41 16.41 cb-s146 cb25.fpc2051 Deletion 25 TTTATGTTGACTGTATTAAGGAAGT/------------------------- ATTATTTGTCTCTGGTGACGTAG GAGATACAAAGAAAATTTGGTCA 300 275 5 17.07 17.74 cb-s381 cb25.fpc4470 Deletion 10 GGAAGCGAAT/---------- AACAAGCAAAGACACACTTTTC TAATTGATAAATTGTTCGCCTTA 301 291 5 17.74 19.68 cb-s151 cb25.fpc2220 Deletion 9 GAAATTGTA/--------- TTGAGTCCACTATTTTCAATTCT TAAGAATCCGAACTTTTAACAAA 302 293 5 17.74 19.68 cb-s152 cb25.fpc2220 Deletion 10 TCTTTCGAAT/---------- ACTCTGTGTCTCTTGCTTCATAC TTTTACTGGTGCAAGAACCT 295 285 5 17.74 19.68 cb-s153 cb25.fpc2220 Insertion 10 ----------/GCCACGATTG GACATATCTAAATGCCTCTCAAA AACATCAACAGGAACTACAAGAA 300 310 5 17.74 19.68 cb-s154 cb25.fpc2220 Insertion 30 ------------------------------/AGAATGTTTTGATTTTTAGGATTTATTTCT GATTGAAAATCAGCACTCATC TGAGTTTCTGATATCGACTCTTG 302 332 5 18.90 18.90 bhP37 cb25.fpc4470 Insertion 10 ----------/GGAAGCGAAT ATTGATAAATTGTTCGCCTTAC ACATTTTTCAAAATCCACTAGC 251 261 5 20.98 22.23 cb-s307 cb25.fpc4126 Deletion 8 ACTTTTTT/-------- ACAACATAGATAGAATCCCTGAA TGGATTTTAAATATGATCGAAAC 340 332 5 20.98 22.23 cb-s308 cb25.fpc4126 Insertion 8 --------/TCGTTTCT CTGAATGGGATAACTCGAAAT ATATTTAAACATTCCGGAAAAA 387 395 5 20.98 22.23 cb-s309 cb25.fpc4126 Insertion 8 --------/CCCCCCCC CAGACAATTTTGACATGTTATTG GTAAGACGGAGAGAATCAGAAA 300 308 5 20.98 22.23 cb-s310 cb25.fpc4126 Insertion 9 ---------/ACTGCTGAT AATCCTCTCCAGAATTAGTGTGT AAGACCTCAAAGAGCACTGATA 300 309 5 26.70 26.70 bhP23 cb25.fpc0090 Insertion 22 ----------------------/AACACTAAATTTTTTTTGGAAC ATTTTAATTTGTCCACCTATTTTT CCTGAATTTCTCAAATTTTATGT 250 272 5 26.70 26.70 bhP5 cb25.fpc0090 Deletion 16 TTTGATATTTTACAAA/---------------- TAAAATTGGAGGAAAGTTTCAAT TTATTTTCAGAGCCGATTTTTA 291 275 5 26.70 26.70 cb-s76 cb25.fpc0090 Insertion 11 -----------/AAAGTTTGAAA TATGGGAACTTCAGACTTATTTC TTTCTAAAGTCAAAGACGCAGT 300 311 5 26.70 26.70 cb-s77 cb25.fpc0090 Insertion 18 ------------------/GAAGTACTTTCAAAGGGC TATGGGAACTTCAGACTTATTTC TTTCTAAAGTCAAAGACGCAGT 300 318 5 37.01 37.70 bhP48 cb25.fpc4063 Deletion 22 CTACGGTTGCGCTAGATGCGCG/---------------------- TGTTAACTCTGGACTATGCTTTC GAAGTAACCCAAACTACAGTAACC 249 227 5 44.70 44.70 cb-s378 cb25.fpc4426a Insertion 27 ---------------------------/ACGGCACGCGAGTCGACACGAGTCGAC TCAATAGAGTGCGTTTGAAAT AATCTTCTATTTCCCATTATATGC 322 349 5 46.07 46.07 cb-s304 cb25.fpc4109 Insertion 9 ---------/AAAAAGAAG CAGAAAAAGAAGAGAAATTTGAA ATAGGCCAATTAAGACCAATTAT 300 309 5 53.78 53.78 bhP24 cb25.fpc0129 Insertion 16 GAGGATCGTTCTTAGT/---------------- GTGAGGAAATTTCTTAGTGATGA TACTGGAAAGTTGGATTTTGAT 242 258 5 53.78 53.78 cb-s89 cb25.fpc0129 Insertion 7 -------/GGATACC ATAGCTCTCGCCTTTTATTTTAC AAGAATGCAACAGATTTACAGAT 298 305 5 53.78 53.78 cb-s90 cb25.fpc0129 Deletion 10 TTTGTAACCG/---------- AGGAATTCAATATTCTAAACCTTCT CTTTCTAGTTTTCAAGGTCACAT 279 269 5 53.78 53.78 cb-s91 cb25.fpc0129 Insertion 10 ----------/GAGCTGCCCA TTTTTCCTATTTCCTCTCATTTT GACTTGTTTGTTTCAGCAAGTT 300 310 5 53.78 53.78 cb-s92 cb25.fpc0129 Insertion 11 -----------/GGCTTGTCTGC TAAAAGGTGATATGGGTTAGTTG CGTCAGGTTAGTAGGGTTACTG 299 310 5 53.78 53.78 cb-s93 cb25.fpc0129 Insertion 27 ---------------------------/GATTAGCTTCAAGAAAAAAGAAAGGTG TGAAACAAAAAGAAACTTAGCTC ACACTCATAAAAATCGGAAATC 301 328 5 53.78 53.78 cb-s194 cb25.fpc2888b Deletion 7 TTTTTTT/------- AAACTTCCCATTATCAACTCAAT AAGAAAAAGTTACTTGCAGTTTTC 300 293 1_random cb-s127 cb25.fpc1402b Deletion 9 AAGAAGAAG/--------- CTCTTCTCTTTTCCTCTAACCAC GATCGATTACCTGAAAATTGTAGT 300 291 1_random cb-s128 cb25.fpc1402b Deletion 13 TCTCTCTCTCTCT/------------- CTCTTCTCTTTTCCTCTAACCAC GATCGATTACCTGAAAATTGTAGT 300 287 1_random cb-s129 cb25.fpc1402b Deletion 16 GTCTCTCTCTCTCTCT/---------------- CTCTTCTCTTTTCCTCTAACCAC GATCGATTACCTGAAAATTGTAGT 300 284 1_random cb-s180 cb25.fpc2852 Insertion 9 ---------/AAGAAGAAG GACTATTGATGGTGTCGAATTT AAAGGAAACAATTTTTCAGAACT 297 306 1_random bhP41 cb25.fpc4180 Insertion 16 ----------------/TTTTCTAGAATTTTCT CTCAGAATCTCAGAAACTCAAAA ACCAAAGTCCAAAGAGAATATG 242 258 1_random cb-s326 cb25.fpc4180 Deletion 8 GATCAAAT/-------- AAGTCCGTGATTTTGACAAC CCACTTCAAACTACACATTTCTAT 351 343 1_random cb-s327 cb25.fpc4180 Deletion 11 ATACAAACTTC/----------- AAGTCCGTGATTTTGACAAC CCACTTCAAACTACACATTTCTAT 351 340 1_random bhP42 cb25.fpc4184 Insertion 15 ---------------/CGGGCCGGGCCGGGC GTAGTCAAAGTTGATGGCTAGG AAGAGAACAAGTTCAGACAAAAA 252 267 2_random cb-s166 cb25.fpc2441 Insertion 7 -------/TTTTTTA TAACTTTGAGCCACCGTAAA CGTTGATAAGAAATTAGTCGAAAT 303 310 2_random cb-s167 cb25.fpc2441 Insertion 16 ----------------/CATAAAATCACAAACA TAACTTTGAGCCACCGTAAA CGTTGATAAGAAATTAGTCGAAAT 303 319 2_random cb-s196 cb25.fpc2969 Insertion 8 --------/AGCAGATG AAATTGAAAAGGAGCAAACTG GTTAGATAAGTGTTTCGCTTTTTAT 301 309 2_random cb-s197 cb25.fpc2969 Deletion 16 GCGACACTTCGAAACC/---------------- AGCGAAGATCAGTATTTTAACG ACTCCCGAAATTGTTATTGTAGT 300 284 2_random cb-s293 cb25.fpc4087 Deletion 7 TTTCAAT/------- TTGAAAGATTCCAGGATTTCTA TGGTAAACATAATAAAAACAGGTG 294 287 2_random cb-s294 cb25.fpc4087 Deletion 7 CCTTATC/------- TTGAAAGATTCCAGGATTTCTA TGGTAAACATAATAAAAACAGGTG 294 287 2_random cb-s295 cb25.fpc4087 Insertion 7 -------/TTTTTTT GATATTTTTCATCATTTTCAGTCA TTTTTGTCCTAAAAATCCCTTA 294 301 2_random cb-s296 cb25.fpc4087 Insertion 7 -------/TGGTTAA ATTTTTCAGAAGCCTTATTTGTC ATTTACACTGCTTCTTCCTCTCT 301 308 2_random cb-s297 cb25.fpc4087 Insertion 8 --------/GGGTTTTT GATATTTTTCATCATTTTCAGTCA TTTTTGTCCTAAAAATCCCTTA 294 302 2_random cb-s298 cb25.fpc4087 Insertion 9 ---------/TGAAAAAGG AATTTTTCAGAAGCCTTATTTGT TTACACTGCTTCTTCCTCTCTTA 300 309 2_random cb-s299 cb25.fpc4087 Deletion 10 CGCAGAGAAA/---------- GGAGGAATGAAGAATAGAGAAAG AATTTTCAATAGAATGGAATCCT 293 283 2_random cb-s300 cb25.fpc4087 Insertion 10 ----------/TACAGTAATC AAATGACCAATTAATTTTTATTCTG CCCATTTTTGATCACTTTTG 283 293 2_random cb-s301 cb25.fpc4087 Insertion 11 -----------/AACATAAAAAA AATTTTTCAGAAGCCTTATTTGT TTACACTGCTTCTTCCTCTCTTA 300 311 2_random cb-s311 cb25.fpc4131 Deletion 7 GAGAATT/------- AAATTATTGAAATCTCCATTCTG TTAGGAATGAATGAAGAGAAAAG 299 292 2_random cb-s312 cb25.fpc4131 Deletion 7 TGAGCTG/------- AATGTTTTTAGAGGGACATAAGG CCAGAACAGCTATAACACTTGA 301 294 2_random cb-s343 cb25.fpc4243 Deletion 7 CTATACT/------- AGATTGAGATGATCGAAGAAGAT GAAAAGCAATTGATCAAAGATAA 298 291 3_random cb-s64 cb25.fpc0066 Deletion 9 TAAAGTCCC/--------- TCCAGAACTCCCAATAGTAGAG GTCTTAGGAATGCAACAAAAA 305 296 3_random cb-s325 cb25.fpc4174 Deletion 23 TTTTGGATGAAATCGCCAAATTT/----------------------- AAAATCCCATTTTTAAGAGCTAA AAATCATTATTCCATATCGACAG 295 272 3_random cb-s363 cb25.fpc4334c Insertion 16 ----------------/ATATTGAATTGCTTGG TCCTAGACCTTTGAAAAATACAA AGACTCTCAAGATTCAAGGAACT 298 314 4_random cb-s266 cb25.fpc4042 Insertion 8 --------/GATTTTTG CAAAAATTAGCACTTTTAGGTCA AAAAGCTAACGATGTCGTATAAT 299 307 4_random cb-s267 cb25.fpc4042 Deletion 21 AGGACTTCAAAGTTGACAATT/--------------------- CAAAAATTAGCACTTTTAGGTCA AAAAGCTAACGATGTCGTATAAT 299 278 4_random cb-s382 cb25.NA_062 Deletion 7 AGATATC/------- GAATTTCAGATGTCTGTGTGTC CAAAGTCCTTGAGTCTATTCTCC 299 292 5_random cb-s99 cb25.fpc0156 Deletion 7 CTAATAA/------- TTATGAAATTCGCAAACTCTCT AAAAATTGAAGAAATCGCTTATT 300 293 5_random cb-s100 cb25.fpc0156 Insertion 7 -------/TCCCCCC ATCAGACAAGAAAGGAAAGAAAC GATAATTGAGCTCGAAGTACAAG 298 305 5_random cb-s101 cb25.fpc0156 Deletion 13 AACCCACCATGAC/------------- GTTGTACTCCATAGCCTATAACG GAAACATGAGAAACAGAAAAAGA 296 283 5_random cb-s329 cb25.fpc4194 Deletion 8 TCAACCTA/-------- CACAGCATCCTGAATAGTTAAAA GGGTAGGTACAGTAATCCAAAAT 321 313 5_random cb-s330 cb25.fpc4194 Deletion 9 CCAAAAGAG/--------- AAAACTCAAAAATCCAAAAATTC AAGTGTGAAAATCCACGTTTT 305 296 5_random cb-s331 cb25.fpc4194 Deletion 10 TTTAAAATAC/---------- CACAGCATCCTGAATAGTTAAAA GGGTAGGTACAGTAATCCAAAAT 321 311 5_random cb-s391 cb25.NA_193 Insertion 13 -------------/TTTTTTTCCATAT CAAGCTAAACTGCTCGAAAA GAAATGTGAAAACCATAACAATG 277 290 X 0.66 0.66 cb-s130 cb25.fpc1402c Insertion 13 -------------/GGAAAATTATAAT GGTATTTTTCAACACTCACATTG ATTCAAAGTTCGATAATTTCTCA 299 312 X 0.66 0.66 cb-s131 cb25.fpc1402c Deletion 15 TATGACCATCAAATA/--------------- CGCACATAACATAGGAGAGATAC AAAATAATCTCGGCAATCTTC 297 282 X 0.66 0.66 cb-s132 cb25.fpc1402c Deletion 24 TGACAGATCATCAACAGCAGCAAA/------------------------ TAGGTTTAGAGAATCCAAGAGTG CAAATGTTACCTTTTCGATCA 316 292 X 0.66 5.64 cb-s261 cb25.fpc4033 Insertion 7 -------/ACATGTA AGACTTAAAATCGTTGGTTTTTC ACTTTTTGTTAAGGTCTGTATGC 300 307 X 0.66 5.64 cb-s262 cb25.fpc4033 Deletion 9 GCTCCGTGG/--------- GCTCCTCTAGTCCTTCTCCTAT AGAAGAAAAGTCGGTTACTGTG 290 281 X 0.66 5.64 cb-s263 cb25.fpc4033 Deletion 10 AACGTCCTCC/---------- CTGTTTTTAGTTCAACCAGCTAC AACAATAACACTTTTTCCTTCAC 299 289 X 0.66 5.64 cb-s264 cb25.fpc4033 Insertion 10 ----------/AGCCTCCGTT AAGGTGAGAATCTTTTTCTCAAT TAGATTTCAATAAGTTGCGTTTT 298 308 X 0.66 5.64 cb-s265 cb25.fpc4033 Insertion 16 ----------------/CCTACCTGGAAAATTT TGTAGAACAAACGCTAATCATATC AGGTTCAAGAACATAAGAAGGAG 300 316 X 9.52 9.52 bhP25 cb25.fpc0045 Deletion 32 --------------------------------/TTTCAAGGAAGTACAAAGCTTAGTTAGTCGTA GTCTCTCCCACTAAATTGATCTT GAGAGAATCTCACGTTTCTTGT 250 218 X 9.52 9.52 cb-s41 cb25.fpc0045 Deletion 7 GGGAGCA/------- GTTCCATGTTTACTTGAAATACG AAAGAATATTTGTGTCGTGTGAT 300 293 X 9.52 9.52 cb-s42 cb25.fpc0045 Insertion 7 -------/TGTAAAA TTTCAAACACAAACTGTCTACAA GCAAGAATTACCGTATTTTTAAG 296 303 X 9.52 9.52 cb-s43 cb25.fpc0045 Insertion 7 -------/GGGGGGG AGAGAAAAGAAGAAAATCGAAAC TAATGCATTGACAAGTAAAGGAG 300 307 X 9.52 9.52 cb-s44 cb25.fpc0045 Deletion 8 GGTCGCTT/-------- AATAAGATGAACTTCGAAACAAA AGTACCTCATTTTTGAGCTTTTC 300 292 X 9.52 9.52 cb-s45 cb25.fpc0045 Insertion 8 --------/ACGCCAAA ATTTCAGATAAAAACCGAGAGAG GCAAGGAAGTTAAAGTCTAGGAG 302 310 X 9.52 9.52 cb-s46 cb25.fpc0045 Insertion 8 --------/CATAATAT CGACTCGAAAATTGACATTAG GAATAATTTAAAAATCGGAAAATG 303 311 X 9.52 9.52 cb-s47 cb25.fpc0045 Deletion 9 TTTGGGGAA/--------- AAGCTGTTTTATGGGTCTAGTCT GCTCTTTTTCTATCCGTTCTATT 299 290 X 9.52 9.52 cb-s48 cb25.fpc0045 Deletion 11 TCGAGAAGATT/----------- ATAGTTGAGGAGTGACGAATTTT TATGTATCTGTCGTTTTCATCCT 299 288 X 9.52 9.52 cb-s49 cb25.fpc0045 Deletion 20 AAAGGATAACTCAATTCAAT/-------------------- GAATTCAGAGTGCAGAAAGTTTA CTGGAACAATATGAGTCACTAGG 300 280 X 9.52 9.52 cb-s50 cb25.fpc0045 Insertion 20 --------------------/AATTTTTTCGAAAATTTTGA AAAAATGGCTAATGTCACTACAA TTTCGCTATCGAGTCAGAATA 297 317 X 9.52 9.52 cb-s278 cb25.fpc4069a Deletion 7 GTTTCAA/------- GTTTTCCCCCTTTCTTTCTAT CTGTTGCTACAGTAACCCTGAT 299 292 X 9.52 9.52 cb-s279 cb25.fpc4069a Deletion 8 TGTATACT/-------- CCAGATTTGAACTAAGTTTTTGA GAAACATGACTCTCAAATGAAAC 300 292 X 9.52 9.52 cb-s280 cb25.fpc4069a Insertion 8 --------/CTCTCTCT AATAAAAACCACTCTTTCTCACC TAATATCGAGACCATTGAACAAC 299 307 X 9.52 9.52 cb-s281 cb25.fpc4069a Deletion 9 AGTGTTGTT/--------- AGGTGTTTATGGAATCATATGTC TTTCTTTTGTATTTGTTGGAAAC 300 291 X 9.52 9.52 cb-s282 cb25.fpc4069a Deletion 10 ACCCCTCGTA/---------- GACTTCAATGATGTTTTCTGTTC AATTTTTCTTTCCTGTCAGAGTT 300 290 X 9.52 9.52 cb-s283 cb25.fpc4069a Deletion 10 ATCATATACT/---------- TTGTGTTTATTGAATTTGCTTTT CGAGTCTAGGGAAATTAAGAAGA 298 288 X 9.52 9.52 cb-s284 cb25.fpc4069a Insertion 11 -----------/TGAGAAATGTT AACAAAACAAATGGACAGGTAG CGTAGACTAAAAATCCAGACAGA 299 310 X 9.52 9.52 cb-s285 cb25.fpc4069a Insertion 17 -----------------/TTTGAAAATGCAATTTA GTACAACGGGGTAAAAGTGAT GCATCTACAGATTTTTCGTTATT 249 266 X 9.52 9.52 cb-s286 cb25.fpc4069a Insertion 21 ---------------------/GTGTTTTTTTTGGATGTTTTT CTATCACCACTTTGGAAGTAGAA GTCAAAACAAAACAAACCTCTC 299 320 X 10.91 10.91 cb-s288 cb25.fpc4069c Insertion 11 -----------/TTTTTATACAT TGTTCAAAATCTCTGGTTTTCTA TTCAATTAGATTGTCAGAATGGT 291 302 X 11.55 11.55 cb-s73 cb25.fpc0083 Insertion 7 -------/AATGACA TACAGTAACGTTTTCGAACTTTT ATTATTTCATGATTGTTGCTTTT 300 307 X 11.55 11.55 cb-s74 cb25.fpc0083 Insertion 7 -------/CCCCCCC AAAAGAAGTCTAAGGAGCAAGAG TAGTCGTTCGTTTTTGGTAGA 300 307 X 11.55 11.55 cb-s75 cb25.fpc0083 Insertion 22 ----------------------/AAAACGATAGTGCATGAACCAA AACTTTCATTCCAGCAAAAA TGTATCGAATGAGAAGAAAAATTA 360 382 X 12.16 14.67 cb-s222 cb25.fpc3857a Deletion 7 GATCGAA/------- GGATCAAATAAGGCATATCATAG CTTAGTGTCAGGTTGCTAAAGAG 300 293 X 12.16 14.67 cb-s223 cb25.fpc3857a Insertion 7 -------/TGCCATC AACACTGACATTTTCCTCAATTA TCTATCAGAAAATCCCATCAAG 300 307 X 12.16 14.67 cb-s224 cb25.fpc3857a Insertion 8 --------/ATTTCAGA GCAATAGTGTTTCGTATTGAGAT GTTTTTGAAATCCGTTAATAAAA 298 306 X 12.16 14.67 cb-s225 cb25.fpc3857a Deletion 12 TGTCCGCTCGTG/------------ CTATTTTGCCAAGGTTTTATGT CCTCTTCTAGTTGTTGTAACGTC 302 290 X 12.16 14.67 cb-s226 cb25.fpc3857a Deletion 12 CAGGAGCATAAA/------------ CTTGACACGTTATCTCATAATTTC CTGAATAATCCCATTAACAAGAA 299 287 X 12.16 14.67 cb-s227 cb25.fpc3857a Insertion 12 ------------/CTCTGGCTCCGG CGTCTGGAACAAGTTATATGTTT AGATCCCATGAGAATTTGATAA 295 307 X 12.16 14.67 cb-s228 cb25.fpc3857a Insertion 15 ---------------/AAACAGAACTGCAGA ACACATTTTATGAACGAAATTTTA ACTGAATGCACTATCAACAACAT 300 315 X 12.16 14.67 cb-s229 cb25.fpc3857a Deletion 19 CTCATTAAGTTAATATATG/------------------- AGTATTGCCCCATTTTTATTATT CTGCAAGAAGCCAAACTATTA 297 278 X 12.16 14.67 cb-s230 cb25.fpc3857a Insertion 26 --------------------------/AGCAGACGGAGAGAAAGCAGTGGGGA TTTTAATCTGTAGCCTCCTCAA TATCGAACACTGTATGAAATGAA 300 326 X 12.16 12.16 cb-s274 cb25.fpc4066 Insertion 8 --------/ATCTCTCT CAATAATCAAAACGCTACAAAA GAAGACTAGCGAACTGATAAAAG 300 308 X 12.16 12.16 cb-s275 cb25.fpc4066 Deletion 19 TATATATATATATATATAT/------------------- ATTTATCTATTTGCCCTGAACTC AAACAAAAACGAAAATCAGTAAA 300 281 X 12.16 12.16 cb-s276 cb25.fpc4066 Deletion 19 TTGAAATTTGTGGGAAACA/------------------- AACCACATCCAAATTACAGAAA TGGTACTATTTGTTCATTTATTCAA 300 281 X 12.16 12.16 cb-s277 cb25.fpc4066 Insertion 21 ---------------------/CCACATTTCATTTTCTTCAAT AGGAAATTGAGTTAGACGTTGA ATTTCTGTAATTTGGATGTGGT 300 321 X 14.67 14.67 cb-s164 cb25.fpc2397 Deletion 14 GAGAGAGAGTGAGA/-------------- TTCTCTTTCTTTCCACGTTTC ACTTTCCATCTGAAGCATCTC 299 285 X 14.67 14.67 cb-s165 cb25.fpc2397 Insertion 14 --------------/TGGAAAGTGAAGAA GAGATGCTTCAGATGGAAAGT TCATTATCTACCACTTTTGCAGT 297 311 X 16.64 19.38 bhP36 cb25.fpc4044b Insertion 11 GAGCCGCCGTC/----------- CGAGATAGTGAGGAGTTCAATAA GACAAAAAGTCCCTAGGTTAGTC 244 255 X 16.64 19.38 cb-s273 cb25.fpc4044b Deletion 7 TAATGAT/------- GGCAGAGAGTGATGTAGGTATTA GAGGTAAAAATCTCAAATCAGAA 299 292 X 20.10 20.71 cb-s6 cb25.fpc0003 Insertion 12 ------------/TTATGATGATGA ACTTCTGAACCACCTTCTGAT ACTCTGATTCATCCTCGTTTT 298 310 X 20.10 20.71 cb-s7 cb25.fpc0003 Insertion 17 -----------------/ACACACACATGATACTC AAATCAATTGGAATTTTCAGTCT GTTTTGGTTTACTGGTAGTTTCA 300 317 X 20.10 20.71 cb-s8 cb25.fpc0003 Insertion 18 ------------------/GGGAATTGTTTGGAATAT CTGTACCGTAATGTTTCGATATT AGCTGAATCATTTCAATTTATGT 300 318 X 20.10 20.71 cb-s9 cb25.fpc0003 Insertion 20 --------------------/GACGTGACTTCACAAGAATA CTTTTTATTTGGTTTGGTTAAAA TGTTCTAACTTCACGAATTACCT 301 321 X 20.10 20.71 cb-s10 cb25.fpc0003 Deletion 23 TCGAAAAATCAAAAATCTTTTTT/----------------------- AGGATAAACTGATCAAACTTGTG AAATTTATTCTCATCGCTAAGGT 300 277 X 20.10 20.71 cb-s11 cb25.fpc0003 Deletion 45 TTCTTTTTTTTTTGGTTTTCTAAAAGTTTTTTCGGTTTTCTAAAA/--------------------------------------------- TAGAATTGCTGTAAGTTTCAGGT ACATATCCAATTGAGTTGTATCC 301 256 X 20.71 24.07 cb-s241 cb25.fpc4023 Insertion 7 -------/TTTTTTT AATCTTCAGTCGGTAATTGAGAT TTCTATTTGCTCAAGTTTTTGAC 300 307 X 20.71 24.07 cb-s242 cb25.fpc4023 Deletion 9 GAGTTACCA/--------- GCATTTTTGCTTTTCATATTGTA AAGTCACAATTCCAACTAACAAG 298 289 X 20.71 24.07 cb-s243 cb25.fpc4023 Insertion 12 ------------/TGAACATGGAAC ATTTCTGCTTCAGTTATTTTTGA AGAAATTGGTAAGATTTGTTCAG 293 305 X 20.71 24.07 cb-s244 cb25.fpc4023 Insertion 13 -------------/TTTTTTTTTTTTT AATCTTCAGTCGGTAATTGAGAT TTCTATTTGCTCAAGTTTTTGAC 300 313 X 20.71 24.07 cb-s245 cb25.fpc4023 Deletion 20 CTCTCTCTCTCTCTCTCTCT/-------------------- CTGGCAGTTTTTAGATCTTCAC ATTCATTTTTCTCGTTTCCTTAG 300 280 X 24.07 24.07 cb-s373 cb25.fpc4403 Deletion 7 CCGCTTT/------- GAGCTCCTTTGGAAAACTTATTA GAGAACGAATGACTTAGTTGAGA 298 291 X 24.07 24.07 cb-s374 cb25.fpc4403 Insertion 7 -------/TTAATTT TCCAGTTTTGAAGAATTTTAGG CCTCATTTGTGTTTGGAATATAA 300 307 X 24.07 24.07 cb-s375 cb25.fpc4403 Insertion 9 ---------/CCCCCCCCC GGAGAAACATAACAAGTGCTTAC GGTGACATAAGAGTCAACAAACT 296 305 X 24.07 24.07 cb-s376 cb25.fpc4403 Deletion 18 TCCGGTCCCAAACTATTT/------------------ GACAGAACCTCGTACGAAAC GAAAGAAGGTTTAAGATTTAAGGTC 304 286 X 24.07 24.07 cb-s377 cb25.fpc4403 Deletion 20 CTCCAAGATCTATAACCACT/-------------------- GAGAACAAGACGAACAACTTTC GAGAAATAGTTTGGGACAGAAAT 299 279 X 26.73 27.38 bhP26 cb25.fpc0106 Insertion 22 ----------------------/CGATTTTGAAATTTGAATATAT GATTTCAGAAGAACATACCAAAA CCGATATCTGTTTTTAACATCTC 251 229 X 26.73 27.38 cb-s82 cb25.fpc0106 Insertion 7 -------/AACTACT TTATAATCAATGAAGCCTGAAAA GTAGGCCTCTTGAGTAGTTGAAT 300 307 X 26.73 27.38 cb-s83 cb25.fpc0106 Insertion 7 -------/GCGTTTT CTTACTCGGAGAAATAGAGATGTT AGTAGCTTCAGAGATGTATCTTTTT 350 357 X 27.38 34.10 bhP49 cb25.fpc0829 Deletion 14 ATAGCAATAAAAAA/-------------- AGATTGAACTTGATGAGCAATAC ATCAAATGATGGTTGACATTG 250 264 X 27.38 34.10 cb-s108 cb25.fpc0829 Deletion 7 TGAACAG/------- AATGGAACTTCTTATTCAACTCA TGAATATCGAAACTAGCTTTATTG 301 294 X 27.38 34.10 cb-s109 cb25.fpc0829 Insertion 7 -------/AATTAAA TGTTTTATGAGCATAATCTGGAC CTTCATCACAGGGTCACTTT 299 306 X 27.38 34.10 cb-s110 cb25.fpc0829 Insertion 7 -------/TTTATTG GATCAACATAAACCATTTTTGAA GTGAGTTTTGTGGCAATAATAAA 300 307 X 27.38 34.10 cb-s111 cb25.fpc0829 Deletion 8 AAAAGACA/-------- GGCACTGTATATCTGAAAAATCA CATTTAGTCCTGACATACTACGAT 303 295 X 27.38 34.10 cb-s112 cb25.fpc0829 Deletion 8 AGCGTTTT/-------- AAACACGAGAAGACACAAAGTAG GTCTGATCTCTTGAACCATCTC 300 292 X 27.38 34.10 cb-s113 cb25.fpc0829 Deletion 8 CTCCTCAT/-------- CAGTCCACTTTATCCTAAAGAGTC AATGTAAGAATAAGATCTGGAAAAA 379 371 X 27.38 34.10 cb-s114 cb25.fpc0829 Insertion 8 --------/ACCATATG GTCAAATTTTTGATGATTCTAGC AATCATACGCTATTTCAATGTTT 300 308 X 27.38 34.10 cb-s115 cb25.fpc0829 Insertion 8 --------/AGAAGTGG CAGTCCACTTTATCCTAAAGAGTC AATGTAAGAATAAGATCTGGAAAAA 379 387 X 27.38 34.10 cb-s116 cb25.fpc0829 Deletion 9 TTCTCAAAA/--------- GAGAAATTTTGATGGAGATAACC ACGGTATTCTGAAATTGAATAAA 300 291 X 27.38 34.10 cb-s117 cb25.fpc0829 Insertion 9 ---------/ATTTATTAT GACGTGTTTTATTGCCTTATATT ACTTCAATAAAATTCGAACTGC 298 307 X 27.38 34.10 cb-s118 cb25.fpc0829 Deletion 11 GACTGACATAA/----------- CAGTCCACTTTATCCTAAAGAGTC AATGTAAGAATAAGATCTGGAAAAA 379 368 X 27.38 34.10 cb-s119 cb25.fpc0829 Insertion 16 ----------------/CTTATATTATTTTATT GATCAACATAAACCATTTTTGAA GTGAGTTTTGTGGCAATAATAAA 300 316 X 27.38 34.10 cb-s120 cb25.fpc0829 Deletion 22 AAACTGTTTCTTTGAGACAAAA/---------------------- AAATTCCATGTGTTCATCATTT TTAGAATAACCGCTTTCATTTAC 300 278 X 27.38 34.10 cb-s121 cb25.fpc0829 Deletion 23 CTCATTTTTAGACCAACTGGAAT/----------------------- TCAATTTCCATGTAATCACTGTT CCTCATTTCATTTTTATTGTTTT 300 277 X 27.38 34.10 cb-s122 cb25.fpc0829 Insertion 23 -----------------------/ACCAATTATTTTCAAATCAAATT CTAATGAACCAACATACGAGTTT AAATAATTAAAATCTTTCAGGCTTA 294 317 X 27.38 34.10 cb-s123 cb25.fpc0829 Deletion 24 ACACACACACACACACACACACAC/------------------------ TATTGCATTTAACACACACACA GTAGCATTTTCTCAATACCGTAA 299 275 X 27.38 34.10 cb-s124 cb25.fpc0829 Deletion 29 TTAAGGGGCCCAAAGTTAAGGGTTAAGGG/----------------------------- TGCTGCAAATTTCTCAAGTT AAGCTAGAAAAGCTGGAACC 304 275