chrom chr_pos cM_min cM_max ultra_contig contig_pos snp_id alleles pcr_p1 pcr_p2 product_size enzyme af16_bands hk104_bands chrI 22743 0.65 0.65 cb25.fpc2695 2720 cb53367 T/G AAAAACTATTGTAATCCCTTTGAA GAAAAACCAATTTTCTCTCTTTT 746 bp MspI 746 463,283 chrI 468320 0.65 0.65 cb25.fpc0006 44978 cb40453 G/A GATTTCTCTATTGGAAATTCCTC TTTGAAAAATATCGAAAAATAGG 736 bp MspI 340,396 736 chrI 2680076 13.45 13.45 cb25.fpc4321 1448423 cb66943 A/G ATCTCCACCATGTGTTAGTTTT AAATAATACCACTTTTCCCATTT 750 bp MspI 750 420,330 chrI 6124397 15.90 15.90 cb25.fpc4238 81841 cb38729 A/G GAGATTGGATAGTCAAGATGAGA AAGATTACCGGATTGTTCAAG 746 bp MspI 505,231,10 274,231,231,10 chrI 6176506 15.90 15.90 cb25.fpc4238 29732 cb14870 G/A ATTCTTAAATGAAATGCAAATGA ATTTGATCAGAACGATAAGTTTG 748 bp MspI 274,474 748 chrI 8927223 20.04 20.04 cb25.fpc4171 151314 cb63952 T/C ATGACTAATAGGCCAGGACATA AGACTACAAGTCAGAAATTGACC 640 bp MspI 153,487 142,11,487 chrI 8929638 20.04 20.04 cb25.fpc4171 148899 cb63927 A/G ATGTTGATTTTCAAATCTTTCTG ATGGAGTCCCTGACTACACTT 689 bp MspI 689 250,439 chrI 9127734 21.23 21.23 cb25.fpc2032 49098 cb37290 A/C GAGAAATTCCGAAAAATTACAA GTCGATTGTATGAATTGTTTCAC 750 bp MspI 692,58 494,198,58 chrI 10791897 43.93 43.93 cb25.fpc4140 482947 cb841 A/G CGTTCCTTTTGAACTTATCAAT AACATGACATTTGCAACTCC 747 bp MspI 445,302 299,146,302 chrII 1465630 2.381 2.381 cb25.fpc4168 88316 cb36654 G/A ACGAGGTGATGAGTTGACTG TTTTGAAAATCTGGAAAAATCTA 713 bp MspI 244,298,171 542,171 chrII 3347867 11.878 13.098 cb25.fpc0011 854356 cb41038 T/C TGAAAAATATTTAGTTCTTGGATTC TCCCACACAAATGTTTGTATAAT 719 bp MspI 25,694 25,440,254 chrII 4670652 18.165 18.165 cb25.fpc0072 468330 cb26590 G/C CTCAAAGTGAGAAATCGGTATT TGAACAGCTGAAAATTAAGAAAT 750 bp MspI 750 348,402 chrII 7227280 21.280 26.584 cb25.fpc0058 2736316 cb43431 C/T ATACTGATGGTTCAGAAGATGTC ACTAACATCTGAAGTCGAATCAA 751 bp MspI 343,408 751 chrII 10747094 27.918 33.950 cb25.fpc4206 783399 cb64536 C/T TAGAGAATGTCTCTTTTCCTCCT AATATCGTAGTTGTGACGATCC 751 bp MspI 313,217,221 530,221 chrII 13737378 49.961 49.961 cb25.fpc0305 775598 cb15880 G/T TGAAAATACAAATTTCAGGGTAA GTTCTTTTGTTGGAGGTGATT 749 bp MspI 216,87,138,308 216,225,308 chrII 14197141 49.961 49.961 cb25.fpc0305 315835 cb12997 T/C TTTTCTGATTTCAAAACACATTT GAAAATGTTATGCGTTCTCTTC 745 bp MspI 745 342,403 chrII 14322417 49.961 49.961 cb25.fpc0305 190559 cb12977 T/C CTATTTGAGCCCGTTACAACT GATCCCTGAAATTTTGATTTT 741 bp MspI 200,541 200,69,472 chrIII 1333365 6.07 6.07 cb25.fpc2587 532318 cb53205 A/C TAGCATTCAGAGCCTTTTAGA ATTTGGCTTCGTACTTCTTCTAT 747 bp MspI 145,602 145,291,311 chrIII 1480916 6.07 6.07 cb25.fpc2587 384767 cb53101 T/C AATCGAATTGATCCAGAGTCTA CTAGAGCCGAATAGTGGTATTTT 750 bp MspI 719,31 328,391,31 chrIII 1514955 6.07 6.07 cb25.fpc2587 350728 cb53058 T/C AGAGATTTGACGTCGTCTGTAG ATTTTAAGAGCCCAAAATTAGC 645 bp MspI 645 462,183 chrIII 2703294 16.84 17.45 cb25.fpc2187 503829 cb49899 A/G TGTTATAAAGTGTGCAAGTTTTG AAAAATATGCTGTAATCGAAAAA 754 bp MspI 754 366,388 chrIII 4417869 24.22 24.22 cb25.fpc2234 244205 cb50801 G/A TATTGGAAGCGGTATAACTCTAA GTTTTGGACATGTTGTTTGTACT 751 bp MspI 271,480 751 chrIII 7783665 24.84 24.84 cb25.fpc4079 992630 cb61642 G/A TCTCTTATGCAGATATTCGAAAC TTTCGCTTTGATATTTTTAAGAC 750 bp MspI 72,383,154,141 72,537,141 chrIII 8929511 26.85 26.85 cb25.fpc0201 375658 cb27215 C/A CATAAGAATGATACGGTAATCAAA GGTAGGCTTCTATAAGAGCAAAA 745 bp MspI 397,348 745 chrIV 1240453 2.5647 5.0969 cb25.fpc3752 728024 cb34260 C/T TAAAAACATCTTTATTCCAGACC TGAAAACATAGCAACGATAGTG 749 bp MspI 330,99,16,304 330,419 chrIV 1878549 7.8753 7.8753 cb25.fpc4250 68362 cb29650 C/T AATGGATGTCTAACCAGAAAAAT AACCTGTTTCAGAATATGGGTAT 747 bp MspI 286,61,40,360 347,40,360 chrIV 2263160 7.8753 7.8753 cb25.fpc4250 452973 cb8943 C/T TCCAAGATTCTGATTTGGTTAT AAAATGATTTCTTTTTGGAGATT 750 bp MspI 346,404 750 chrIV 2604617 9.1912 9.776 cb25.fpc4118 203503 cb8177 T/C CTTAAGAAATACGGTTGGATGA CTGTACCCTACATACACTGTGACT 697 bp MspI 697 199,498 chrIV 4574188 17.6194 17.6194 cb25.fpc4260 94905 cb65829 G/T GTTTCCCAAAGAATAACTGTTG GAAGCAACTTTTTGAGGTTTTA 723 bp MspI 48,405,270 48,675 chrIV 6368811 18.1974 18.1974 cb25.fpc0143 360660 cb46568 A/G AAGTTGTTGAGACATTGCTTATC TTCACAGTTTCGATTTATGTGTA 750 bp MspI 515,65,170 276,239,65,170 chrIV 7327761 18.1974 18.1974 cb25.fpc0110 598191 cb46169 T/G TCAGATGCTACCAGATGAGAA TTTGTTCTGAATTACAGTAGTCGT 748 bp MspI 339,98,311 339,98,28,283 chrIV 8453529 18.1974 18.1974 cb25.fpc4152 324108 cb63408 T/C AATGGTAGCCATATGATGAAATA TACCGATAATTTCCTTCTTCAC 749 bp MspI 229,520 229,43,477 chrIV 8810516 18.1974 18.1974 cb25.fpc4152 681095 cb9595 G/A TTTTTGAATATTTCACAACACTTC GGTTTCAACGAAATGATAGAGTA 740 bp MspI 174,103,463 174,566 chrIV 9333836 18.1974 18.1974 cb25.fpc4152 1204415 cb63671 T/C ATTCCTACTTCCATTTTGATTTT AACTTCAATGTTTTTCAAAGGTT 750 bp MspI 236,73,441 236,73,99,342 chrIV 9553531 18.1974 18.8686 cb25.fpc0039 1087936 cb13874 G/A AGTCTGAAATCAACAGATGAAAC TATGATCTTCTATTTCGCAATTC 747 bp MspI 247,54,286,160 247,340,160 chrIV 9565517 18.1974 18.8686 cb25.fpc0039 1075950 cb13872 G/C AAAGTTTTAGGAAAGGAGTTCAC GATATGCCCCTAGTTTTCTATTT 743 bp MspI 343,136,264 479,264 chrIV 12489515 20.6028 20.6028 cb25.fpc4090 69061 cb14876 C/T TTGAAATTTTTAGTCTTGGATTC CTCGATTTTCTCGAATTTTAAC 744 bp MspI 468,242,34 710,34 chrIV 13534368 30.9568 30.9568 cb25.fpc0107 81086 cb45949 G/A AAATTTCCCCATACTCGTATTT TAGAACATCAAGAAAGCCTTTTA 746 bp MspI 400,8,338 400,346 chrIV 13613405 37.5236 41.1551 cb25.fpc3835 785251 cb56271 C/A GATACGTTTTGGTTTGTAACTTC CAAACAAAAATGACTACAGCATA 750 bp MspI 428,126,196 554,196 chrIV 14489872 42.3897 42.9612 cb25.fpc2328 138017 cb51449 A/G ACTGAGAACGTCTTAGTTTTTCA GTCACGGTATTTTGACAGATAAT 744 bp MspI 308,436 308,92,344 chrV 1071142 0.6536 0.6536 cb25.fpc0024 282541 cb39430 T/C AGGATCAGTTTTGCTATTCTTTT GTCCCCAAAGTATAATTGATAGG 748 bp MspI 748 250,498 chrV 1781701 2.5021 3.1557 cb25.fpc2114 78856 cb49544 G/A TACGAAAGGGATATTTGAAGTTT AATGGATGATCATTTTGTAACAC 754 bp MspI 339,73,342 412,342 chrV 1993196 2.5021 3.1557 cb25.fpc2114 290351 cb49676 T/C CCTTGATTTACTTTAAACTTCTTTC AGAATTCTTCAAACGTTTTCTTC 628 bp MspI 223,219,186 136,87,219,186 chrV 3803841 8.2837 8.2837 cb25.fpc0023 341870 cb35035 G/A GGGTTTTATTGATTACGGTATG GTTTCCAGAGGATATTTTGTTTT 750 bp MspI 236,213,301 236,514 chrV 4337637 8.2837 8.2837 cb25.fpc0023 875666 cb4928 A/C TGGTTAGCACAAATATCTCTTTC CATGAATTGATGATACCCTTCT 748 bp MspI 128,620 128,320,300 chrV 6098148 17.0669 17.7381 cb25.fpc4470 1439395 cb285 C/T GTGAGGACAAAGTTCGTATAATC AGGAGAAGAGAAAAGTAGGGTTA 748 bp MspI 311,437 748 chrV 7726265 17.7381 19.6775 cb25.fpc2220 1726917 cb50600 G/A GTAGCGAATATTTAACAGCAATG ACACATGGTGATTGATAAGAAAC 744 bp MspI 378,366 744 chrV 9688360 20.9763 22.2264 cb25.fpc4126 235079 cb62617 C/T ACAGTTTCTACTCACAAAAGGTG TAAGTTAGTTCGTGTTTCACAGA 749 bp MspI 276,186,287 462,287 chrV 10590073 20.9763 22.2264 cb25.fpc4126 1136792 cb62788 C/G GAGAGAACAAAGCACAATTTTTA TATTCTTAGATTTTGCGAAACAC 746 bp MspI 359,387 746 chrV 11040534 20.9763 22.2264 cb25.fpc4126 1587253 cb39276 G/C TTGCCTTTTTATAGTGAGATGTAA TACAGATGTGATTGCAAGAAAC 750 bp MspI 38,403,309 38,712 chrV 11381635 20.9763 22.2264 cb25.fpc4126 1928354 cb39320 T/C AACTATAGTACTTGGAATCGTGACT TAAAATTTTGAAAGAGGACACTG 608 bp MspI 608 443,165 chrV 11481294 20.9763 22.2264 cb25.fpc4126 2028013 cb39346 A/G GGCATTTCTCTGAACAGATTT AAGAGTTATTTTTCGTAACAGTCA 735 bp MspI 289,446 255,34,446 chrV 11527007 20.9763 22.2264 cb25.fpc4126 2073726 cb22546 A/C CCTATCTTATCACACTAATCCAAGA GGACAATCCTCGTTATCATCTAT 736 bp MspI 102,78,556 102,78,315,241 chrV 14735729 46.0692 46.0692 cb25.fpc4109 323147 cb12910 C/T CAATTATTCGATAGAAGTGTTGAG TTTTTGCTTCCACGTATGTT 743 bp MspI 426,317 743 chrX 1379476 0.6623 5.6449 cb25.fpc4033 1733077 cb38643 G/A GAATGAAGCCATCTGAAATTAG AAAAATTAGTGAAAACCGAATCT 744 bp MspI 425,319 744 chrX 1867738 0.6623 5.6449 cb25.fpc4033 1244815 cb21228 C/A ATACCTTTAATTGGGTCTGAAAA TGCGAAATTCTGAGAAAACT 751 bp MspI 306,336,109 642,109 chrX 1917462 0.6623 5.6449 cb25.fpc4033 1195091 cb21207 G/A ATTTCAAGTCCCCTACACCT ACTTCCTAGAGCAGTTATCACCT 749 bp MspI 287,462 749 chrX 3555333 9.5228 9.5228 cb25.fpc0045 442681 cb20281 A/C CCATTACTATCATGGAATTTTTG AATATTCTAGCATTTCCCAATTT 749 bp MspI 749 326,423 chrX 4213646 9.5228 9.5228 cb25.fpc0045 1100994 cb42501 A/G AGTGTGTCACTCTTGTCTGAAAT GGAGATGGATAAGGAATTATAGG 747 bp MspI 319,226,202 319,31,195,202 chrX 4291163 9.5228 9.5228 cb25.fpc0045 1178511 cb20571 A/G GAATAACAACCATCAAGTCAATC ACTAGTCAAACCCAAGGATAACT 748 bp MspI 748 306,442 chrX 4480800 9.5228 9.5228 cb25.fpc0045 1368148 cb42574 C/T AGGGAAAAGAAAATTGAAAAAG GCTTTCCATGACAAATATAAGAA 747 bp MspI 451,122,174 747 chrX 4480923 9.5228 9.5228 cb25.fpc0045 1368271 cb42575 G/A TCTCTATTCCTTCGTGTATTTTG ATCTTCCAGAAGACTCTGAAAAC 743 bp MspI 143,122,478 743 chrX 6799076 12.1622 12.1622 cb25.fpc4066 606883 cb60445 T/C AAGAGGTCATACGAGTCTTGTT GTAAAGCTTTTTCTCGGAAGTT 750 bp MspI 750 286,464 chrX 7049076 12.1622 12.1622 cb25.fpc4066 356883 cb60224 C/T ATATTTTCTCAGGTCTTGGAAGT CACAGAAGATTTTATTGCTGAA 749 bp MspI 51,313,385 51,698 chrX 15831959 20.7089 24.0659 cb25.fpc4023 278222 cb27667 T/G TCTTTGCCAAATAATATAAACTTTC TACAGTATTGAATGTGCTGAAAA 747 bp MspI 747 332,415 chrX 16236888 24.0659 24.0659 cb25.fpc4403 126608 cb67868 T/C ATAATCGAACCAGGTCTTACAA TAGCATGAAAATCTGCTTTAAGT 750 bp MspI 750 397,353 chrX 16387774 24.0659 24.0659 cb25.fpc4403 277494 cb5842 G/A TCCTAATAGTTTTCGATTTTCAA AGGACCAAAAATAATCTAAGGAC 750 bp MspI 367,383 750 chrX 16556105 24.0659 24.0659 cb25.fpc4403 445825 cb6001 G/T GACTCACTGAAGAATGTCGTAAC TGACGGAATAATGTATCAACTTT 746 bp MspI 421,34,98,193 421,132,193 chrX 16741814 26.7332 27.3783 cb25.fpc0106 16006 cb45637 G/A CAAATAGTGACTCTAGACGAGGT AAGAGAAGTGTGAAAATGAACC 748 bp MspI 354,394 748 chrX 16747867 26.7332 27.3783 cb25.fpc0106 22059 cb45649 A/C TAAATTTATCGAAACTTGCTCAT CGCTTCTTCTATTTCTCCTCTAT 751 bp MspI 751 283,468 chrX 18776699 27.3783 34.1035 cb25.fpc0829 1423444 cb47968 A/G AACTGAGAAACAATTTTCAGAAG TGGTGTAGTTTCTAGGTCATTTT 748 bp MspI 583,165 402,181,165 chrX 19051854 27.3783 34.1035 cb25.fpc0829 1148289 cb15526 A/C CCACTTTTACAGGAAACAAGATA TTTTTCAGTTTTACAAACCTTTC 749 bp MspI 749 297,452