{"id":714,"date":"2022-04-22T23:25:00","date_gmt":"2022-04-23T03:25:00","guid":{"rendered":"http:\/\/www.briggsae.org\/?p=714"},"modified":"2023-03-24T21:21:21","modified_gmt":"2023-03-25T01:21:21","slug":"stevens-et-al-2022-report-reference-genomes-for-two-new-c-briggsae-strains","status":"publish","type":"post","link":"https:\/\/www.briggsae.org\/?p=714","title":{"rendered":"Stevens et al. (2022) report reference genomes for two new C. briggsae strains"},"content":{"rendered":"\n<p>Stevens et al. (2022). Chromosome-Level Reference Genomes for Two Strains of <em>Caenorhabditis briggsae<\/em>: An Improved Platform for Comparative Genomics. Genome Biology and Evolution. <\/p>\n\n\n\n<p><a href=\"https:\/\/academic.oup.com\/gbe\/article\/14\/4\/evac042\/6554914\" target=\"_blank\" rel=\"noreferrer noopener\">https:\/\/academic.oup.com\/gbe\/article\/14\/4\/evac042\/65549<\/a><a href=\"https:\/\/academic.oup.com\/gbe\/article\/14\/4\/evac042\/6554914\">14<\/a><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p>This paper reports chromosome-level sequences for two <em>C. briggsae<\/em> strains QX1410 (closely-related AF16) and VX34 (a highly divergent strain isolated in China). Recombinant inbred lines were also isolated to create a recombination map and chromosomal domains. RNA sequencing data were generated to annotate genes. The new genomes improve resources for <em>C. briggsae<\/em> and promise to accelerate comparative genomic and evolutionary studies involving nematodes. <\/p>\n\n\n\n<p><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Stevens et al. (2022). Chromosome-Level Reference Genomes for Two Strains of Caenorhabditis briggsae: An Improved Platform for Comparative Genomics. Genome Biology and Evolution. https:\/\/academic.oup.com\/gbe\/article\/14\/4\/evac042\/6554914 This paper reports chromosome-level sequences for two C. briggsae strains QX1410 (closely-related AF16) and VX34 (a highly divergent strain isolated in China). Recombinant inbred lines were also isolated to create a &hellip; <a href=\"https:\/\/www.briggsae.org\/?p=714\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_coblocks_attr":"","_coblocks_dimensions":"","_coblocks_responsive_height":"","_coblocks_accordion_ie_support":"","footnotes":""},"categories":[20],"tags":[],"class_list":["post-714","post","type-post","status-publish","format-standard","hentry","category-news"],"_links":{"self":[{"href":"https:\/\/www.briggsae.org\/index.php?rest_route=\/wp\/v2\/posts\/714","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.briggsae.org\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.briggsae.org\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.briggsae.org\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.briggsae.org\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=714"}],"version-history":[{"count":2,"href":"https:\/\/www.briggsae.org\/index.php?rest_route=\/wp\/v2\/posts\/714\/revisions"}],"predecessor-version":[{"id":814,"href":"https:\/\/www.briggsae.org\/index.php?rest_route=\/wp\/v2\/posts\/714\/revisions\/814"}],"wp:attachment":[{"href":"https:\/\/www.briggsae.org\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=714"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.briggsae.org\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=714"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.briggsae.org\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=714"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}